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  5. GSVIVT01001074001

GSVIVT01001074001


Description : Class V chitinase OS=Arabidopsis thaliana


Gene families : OG0000905 (Archaeplastida) Phylogenetic Tree(s): OG0000905_tree ,
OG_05_0000646 (LandPlants) Phylogenetic Tree(s): OG_05_0000646_tree ,
OG_06_0000436 (SeedPlants) Phylogenetic Tree(s): OG_06_0000436_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01001074001
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AT4G19740 No alias Glycosyl hydrolase superfamily protein 0.04 Archaeplastida
AT4G19750 No alias Glycosyl hydrolase family protein with chitinase insertion domain 0.03 Archaeplastida
AT4G19760 No alias Glycosyl hydrolase family protein with chitinase insertion domain 0.04 Archaeplastida
AT4G19770 No alias Glycosyl hydrolase family protein with chitinase insertion domain 0.03 Archaeplastida
GSVIVT01001068001 No alias Class V chitinase OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_00910 No alias Class V chitinase OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_04931 No alias no description available(sp|a0a072ur65|cht5b_medtr :... 0.03 Archaeplastida
Gb_10730 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g27400.1 No alias no description available(sp|u5n4e3|nfh1_medtr : 191.0) &... 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
CC GO:0017119 Golgi transport complex IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 77 317
No external refs found!