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Description : RNA biosynthesis.transcriptional activation.AS2/LOB transcription factor
Gene families : OG0000101 (Archaeplastida) Phylogenetic Tree(s): OG0000101_tree ,
OG_05_0000037 (LandPlants) Phylogenetic Tree(s): OG_05_0000037_tree ,
OG_06_0000043 (SeedPlants) Phylogenetic Tree(s): OG_06_0000043_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01003547001 | |
| Cluster | HCCA: Cluster_65 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00021p00187850 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.06 | Archaeplastida | |
| AT1G06280 | LBD2 | LOB domain-containing protein 2 | 0.07 | Archaeplastida | |
| AT1G65620 | AS2 | Lateral organ boundaries (LOB) domain family protein | 0.06 | Archaeplastida | |
| AT2G28500 | LBD11 | LOB domain-containing protein 11 | 0.03 | Archaeplastida | |
| AT2G30340 | LBD13 | LOB domain-containing protein 13 | 0.03 | Archaeplastida | |
| GSVIVT01010625001 | No alias | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.02 | Archaeplastida | |
| Gb_03653 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| Gb_08465 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| Gb_13424 | No alias | transcription factor (AS2/LOB) | 0.02 | Archaeplastida | |
| Gb_20398 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| Gb_20676 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| Gb_23688 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| Gb_38978 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| Gb_40767 | No alias | transcription factor (AS2/LOB) | 0.05 | Archaeplastida | |
| LOC_Os01g14030.1 | No alias | transcription factor (AS2/LOB) | 0.05 | Archaeplastida | |
| LOC_Os03g17810.1 | No alias | transcription factor (AS2/LOB) | 0.04 | Archaeplastida | |
| LOC_Os05g07270.1 | No alias | transcription factor (AS2/LOB) | 0.02 | Archaeplastida | |
| LOC_Os09g19950.1 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| MA_10430986g0010 | No alias | transcription factor (AS2/LOB) | 0.02 | Archaeplastida | |
| MA_10434782g0020 | No alias | transcription factor (AS2/LOB) | 0.04 | Archaeplastida | |
| MA_127139g0010 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| MA_16891g0010 | No alias | transcription factor (AS2/LOB) | 0.02 | Archaeplastida | |
| Solyc02g086480.1.1 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| Solyc03g095940.1.1 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| Solyc03g112430.1.1 | No alias | transcription factor (AS2/LOB) | 0.02 | Archaeplastida | |
| Solyc06g005090.3.1 | No alias | transcription factor (AS2/LOB) | 0.02 | Archaeplastida | |
| Solyc06g050950.3.1 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| Solyc06g082310.3.1 | No alias | transcription factor (AS2/LOB) | 0.04 | Archaeplastida | |
| Solyc06g082430.2.1 | No alias | transcription factor (AS2/LOB) | 0.05 | Archaeplastida | |
| Solyc12g010810.1.1 | No alias | transcription factor (AS2/LOB) | 0.08 | Archaeplastida | |
| Zm00001e026736_P001 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| Zm00001e030195_P001 | No alias | transcription factor (AS2/LOB) | 0.04 | Archaeplastida | |
| Zm00001e031510_P001 | No alias | transcription factor (AS2/LOB) | 0.03 | Archaeplastida | |
| Zm00001e038429_P001 | No alias | transcription factor (AS2/LOB) | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003756 | protein disulfide isomerase activity | IEP | Neighborhood |
| MF | GO:0004347 | glucose-6-phosphate isomerase activity | IEP | Neighborhood |
| CC | GO:0005741 | mitochondrial outer membrane | IEP | Neighborhood |
| CC | GO:0005783 | endoplasmic reticulum | IEP | Neighborhood |
| BP | GO:0006006 | glucose metabolic process | IEP | Neighborhood |
| BP | GO:0006094 | gluconeogenesis | IEP | Neighborhood |
| MF | GO:0015077 | monovalent inorganic cation transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | Neighborhood |
| MF | GO:0016853 | isomerase activity | IEP | Neighborhood |
| MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Neighborhood |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | Neighborhood |
| MF | GO:0016864 | intramolecular oxidoreductase activity, transposing S-S bonds | IEP | Neighborhood |
| BP | GO:0019319 | hexose biosynthetic process | IEP | Neighborhood |
| CC | GO:0019867 | outer membrane | IEP | Neighborhood |
| CC | GO:0031968 | organelle outer membrane | IEP | Neighborhood |
| BP | GO:0046364 | monosaccharide biosynthetic process | IEP | Neighborhood |
| MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
| CC | GO:0098588 | bounding membrane of organelle | IEP | Neighborhood |
| CC | GO:0098805 | whole membrane | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004883 | LOB | 7 | 89 |
| No external refs found! |