GSVIVT01003547001


Description : RNA biosynthesis.transcriptional activation.AS2/LOB transcription factor


Gene families : OG0000101 (Archaeplastida) Phylogenetic Tree(s): OG0000101_tree ,
OG_05_0000037 (LandPlants) Phylogenetic Tree(s): OG_05_0000037_tree ,
OG_06_0000043 (SeedPlants) Phylogenetic Tree(s): OG_06_0000043_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01003547001
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00187850 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.06 Archaeplastida
AT1G06280 LBD2 LOB domain-containing protein 2 0.07 Archaeplastida
AT1G65620 AS2 Lateral organ boundaries (LOB) domain family protein 0.06 Archaeplastida
AT2G28500 LBD11 LOB domain-containing protein 11 0.03 Archaeplastida
AT2G30340 LBD13 LOB domain-containing protein 13 0.03 Archaeplastida
GSVIVT01010625001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 Archaeplastida
Gb_03653 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Gb_08465 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Gb_13424 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Gb_20398 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Gb_20676 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Gb_23688 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Gb_38978 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Gb_40767 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida
LOC_Os01g14030.1 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida
LOC_Os03g17810.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
LOC_Os05g07270.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
LOC_Os09g19950.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_10430986g0010 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
MA_10434782g0020 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
MA_127139g0010 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_16891g0010 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc02g086480.1.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Solyc03g095940.1.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Solyc03g112430.1.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc06g005090.3.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc06g050950.3.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Solyc06g082310.3.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Solyc06g082430.2.1 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida
Solyc12g010810.1.1 No alias transcription factor (AS2/LOB) 0.08 Archaeplastida
Zm00001e026736_P001 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Zm00001e030195_P001 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Zm00001e031510_P001 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Zm00001e038429_P001 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003756 protein disulfide isomerase activity IEP Neighborhood
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006094 gluconeogenesis IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Neighborhood
BP GO:0019319 hexose biosynthetic process IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
BP GO:0046364 monosaccharide biosynthetic process IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 7 89
No external refs found!