GSVIVT01007451001

Description : Patatin-like protein 2 OS=Arabidopsis thaliana

Gene families : OG0000272 (Archaeplastida) Phylogenetic Tree(s): OG0000272_tree ,
OG_05_0000217 (LandPlants) Phylogenetic Tree(s): OG_05_0000217_tree ,
OG_06_0000130 (SeedPlants) Phylogenetic Tree(s): OG_06_0000130_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01007451001
Cluster	HCCA: Cluster_80

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00126p00052700	evm_27.TU.AmTr_v1...	Lipid metabolism.lipid degradation.phospholipase...	0.07	Archaeplastida
AMTR_s00126p00052810	evm_27.TU.AmTr_v1...	Patatin-like protein 2 OS=Arabidopsis thaliana	0.07	Archaeplastida
AMTR_s00126p00054960	evm_27.TU.AmTr_v1...	Patatin-like protein 2 OS=Arabidopsis thaliana	0.07	Archaeplastida
AMTR_s00126p00059430	evm_27.TU.AmTr_v1...	Lipid metabolism.lipid degradation.phospholipase...	0.07	Archaeplastida
AMTR_s00126p00063230	evm_27.TU.AmTr_v1...	Lipid metabolism.lipid degradation.phospholipase...	0.06	Archaeplastida
AT4G37060	AtPLAIVB, PLA IVB, PLP5	PATATIN-like protein 5	0.04	Archaeplastida
AT5G43590	No alias	Acyl transferase/acyl hydrolase/lysophospholipase...	0.04	Archaeplastida
GSVIVT01009537001	No alias	Lipid metabolism.lipid degradation.phospholipase...	0.1	Archaeplastida
GSVIVT01009541001	No alias	Lipid metabolism.lipid degradation.phospholipase...	0.11	Archaeplastida
GSVIVT01009543001	No alias	Lipid metabolism.lipid degradation.phospholipase...	0.12	Archaeplastida
GSVIVT01009549001	No alias	Lipid metabolism.lipid degradation.phospholipase...	0.08	Archaeplastida
GSVIVT01022149001	No alias	Lipid metabolism.lipid degradation.phospholipase...	0.06	Archaeplastida
GSVIVT01022152001	No alias	Lipid metabolism.lipid degradation.phospholipase...	0.04	Archaeplastida
GSVIVT01028160001	No alias	Lipid metabolism.lipid degradation.phospholipase...	0.03	Archaeplastida
GSVIVT01033249001	No alias	No description available	0.04	Archaeplastida
LOC_Os08g28880.1	No alias	phospholipase A2 (pPLA2-II)	0.03	Archaeplastida
LOC_Os08g37180.1	No alias	phospholipase A2 (pPLA2-II)	0.06	Archaeplastida
LOC_Os08g37210.1	No alias	phospholipase A2 (pPLA2-II)	0.03	Archaeplastida
LOC_Os08g37250.1	No alias	phospholipase A2 (pPLA2-II)	0.03	Archaeplastida
LOC_Os12g36530.1	No alias	phospholipase A2 (pPLA2-II)	0.03	Archaeplastida
MA_10041588g0010	No alias	phospholipase A2 (pPLA2-II)	0.03	Archaeplastida
MA_10430702g0010	No alias	No annotation	0.03	Archaeplastida
MA_10436005g0010	No alias	Patatin-like protein 2 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
MA_119781g0010	No alias	No annotation	0.02	Archaeplastida
MA_257043g0010	No alias	phospholipase A2 (pPLA2-II)	0.04	Archaeplastida
MA_270895g0010	No alias	phospholipase A2 (pPLA2-II)	0.05	Archaeplastida
MA_291496g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_468579g0010	No alias	phospholipase A2 (pPLA2-II)	0.04	Archaeplastida
MA_8049g0010	No alias	phospholipase A2 (pPLA2-II)	0.04	Archaeplastida
Pp3c10_13540V3.1	No alias	phospholipase A 2A	0.04	Archaeplastida
Smo438927	No alias	Lipid metabolism.lipid degradation.phospholipase...	0.02	Archaeplastida
Smo81931	No alias	Lipid metabolism.lipid degradation.phospholipase...	0.04	Archaeplastida
Solyc02g090490.3.1	No alias	phospholipase A2 (pPLA2-II)	0.03	Archaeplastida
Solyc02g090630.4.1	No alias	phospholipase A2 (pPLA2-II)	0.03	Archaeplastida
Solyc02g090640.4.1	No alias	Patatin-like protein 2 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Solyc04g079260.3.1	No alias	phospholipase A2 (pPLA2-II)	0.03	Archaeplastida
Solyc08g006860.3.1	No alias	phospholipase A2 (pPLA2-II)	0.04	Archaeplastida
Zm00001e003817_P001	No alias	phospholipase A2 (pPLA2-II)	0.02	Archaeplastida
Zm00001e003820_P001	No alias	phospholipase A2 (pPLA2-II)	0.05	Archaeplastida
Zm00001e003821_P001	No alias	phospholipase A2 (pPLA2-II)	0.05	Archaeplastida
Zm00001e011312_P001	No alias	phospholipase A2 (pPLA2-II)	0.03	Archaeplastida
Zm00001e018567_P002	No alias	Patatin-like protein 2 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Zm00001e021171_P002	No alias	phospholipase A2 (pPLA2-II)	0.03	Archaeplastida
Zm00001e024413_P001	No alias	phospholipase A2 (pPLA2-II)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0006629	lipid metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004568	chitinase activity	IEP	Neighborhood
MF	GO:0004592	pantoate-beta-alanine ligase activity	IEP	Neighborhood
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
BP	GO:0006022	aminoglycan metabolic process	IEP	Neighborhood
BP	GO:0006026	aminoglycan catabolic process	IEP	Neighborhood
BP	GO:0006030	chitin metabolic process	IEP	Neighborhood
BP	GO:0006032	chitin catabolic process	IEP	Neighborhood
BP	GO:0006040	amino sugar metabolic process	IEP	Neighborhood
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	Neighborhood
BP	GO:0006766	vitamin metabolic process	IEP	Neighborhood
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	Neighborhood
BP	GO:0006950	response to stress	IEP	Neighborhood
BP	GO:0006979	response to oxidative stress	IEP	Neighborhood
BP	GO:0009110	vitamin biosynthetic process	IEP	Neighborhood
BP	GO:0009889	regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0015939	pantothenate metabolic process	IEP	Neighborhood
BP	GO:0015940	pantothenate biosynthetic process	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016881	acid-amino acid ligase activity	IEP	Neighborhood
MF	GO:0016887	ATPase activity	IEP	Neighborhood
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Neighborhood
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0019222	regulation of metabolic process	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0030599	pectinesterase activity	IEP	Neighborhood
BP	GO:0031323	regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Neighborhood
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	Neighborhood
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0042545	cell wall modification	IEP	Neighborhood
BP	GO:0042737	drug catabolic process	IEP	Neighborhood
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Neighborhood
BP	GO:0045229	external encapsulating structure organization	IEP	Neighborhood
BP	GO:0046348	amino sugar catabolic process	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051252	regulation of RNA metabolic process	IEP	Neighborhood
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0071554	cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0071555	cell wall organization	IEP	Neighborhood
BP	GO:0080090	regulation of primary metabolic process	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
BP	GO:1901071	glucosamine-containing compound metabolic process	IEP	Neighborhood
BP	GO:1901072	glucosamine-containing compound catabolic process	IEP	Neighborhood
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002641	PNPLA_dom	5	204

External Links

No external refs found!

GSVIVT01007451001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation