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  5. GSVIVT01007589001

GSVIVT01007589001


Description : Protein JINGUBANG OS=Arabidopsis thaliana


Gene families : OG0000380 (Archaeplastida) Phylogenetic Tree(s): OG0000380_tree ,
OG_05_0000225 (LandPlants) Phylogenetic Tree(s): OG_05_0000225_tree ,
OG_06_0000140 (SeedPlants) Phylogenetic Tree(s): OG_06_0000140_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01007589001
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00162370 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00109p00134110 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00156p00066850 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.02 Archaeplastida
AT3G18950 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Archaeplastida
AT5G50120 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Archaeplastida
Gb_14478 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_26404 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_33494 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g13140.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os03g42710.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os03g52870.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os12g40260.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.01 Archaeplastida
MA_10431396g0020 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_107471g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_28858g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_3813099g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c11_2770V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Archaeplastida
Pp3c4_25840V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Archaeplastida
Smo66275 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.04 Archaeplastida
Solyc12g044320.2.1 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003756 protein disulfide isomerase activity IEP Neighborhood
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006094 gluconeogenesis IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Neighborhood
BP GO:0019319 hexose biosynthetic process IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
BP GO:0046364 monosaccharide biosynthetic process IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 214 249
IPR001680 WD40_repeat 310 339
IPR001680 WD40_repeat 349 389
No external refs found!