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  5. GSVIVT01011939001

GSVIVT01011939001


Description : RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.other.MED25 component


Gene families : OG0004928 (Archaeplastida) Phylogenetic Tree(s): OG0004928_tree ,
OG_05_0004020 (LandPlants) Phylogenetic Tree(s): OG_05_0004020_tree ,
OG_06_0004964 (SeedPlants) Phylogenetic Tree(s): OG_06_0004964_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011939001
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
Pp3c25_2660V3.1 No alias phytochrome and flowering time regulatory protein (PFT1) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006013 mannose metabolic process IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR021419 Mediator_Med25_VWA 3 226
No external refs found!