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  5. GSVIVT01013389001

GSVIVT01013389001


Description : Regulator of telomere elongation helicase 1 homolog OS=Arabidopsis thaliana


Gene families : OG0002051 (Archaeplastida) Phylogenetic Tree(s): OG0002051_tree ,
OG_05_0008335 (LandPlants) Phylogenetic Tree(s): OG_05_0008335_tree ,
OG_06_0008484 (SeedPlants) Phylogenetic Tree(s): OG_06_0008484_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01013389001
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AT1G20720 No alias RAD3-like DNA-binding helicase protein 0.19 Archaeplastida
Cre02.g089600 No alias No description available 0.03 Archaeplastida
Cre02.g089608 No alias Regulator of telomere elongation helicase 1 homolog... 0.04 Archaeplastida
Cre09.g397350 No alias Regulator of telomere elongation helicase 1 homolog... 0.02 Archaeplastida
Gb_36664 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g37920.1 No alias Regulator of telomere elongation helicase 1 homolog... 0.08 Archaeplastida
MA_959247g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp7g07280.1 No alias Regulator of telomere elongation helicase 1 homolog... 0.03 Archaeplastida
Smo408754 No alias Regulator of telomere elongation helicase 1 homolog... 0.05 Archaeplastida
Solyc10g079510.3.1 No alias Regulator of telomere elongation helicase 1 homolog... 0.21 Archaeplastida
Zm00001e034917_P001 No alias Regulator of telomere elongation helicase 1 homolog... 0.16 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0004003 ATP-dependent DNA helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000796 condensin complex IEP Neighborhood
CC GO:0000808 origin recognition complex IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006270 DNA replication initiation IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006323 DNA packaging IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
BP GO:0007076 mitotic chromosome condensation IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0030261 chromosome condensation IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051301 cell division IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
MF GO:0061505 DNA topoisomerase II activity IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
InterPro domains Description Start Stop
IPR006555 ATP-dep_Helicase_C 585 737
IPR010614 DEAD_2 140 287
No external refs found!