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Aliases : evm_27.TU.AmTr_v1.0_scaffold00038.242
Description : RNA biosynthesis.RNA polymerase I-dependent transcription.CCG/MEE12 transcription initiation factor
Gene families : OG0006035 (Archaeplastida) Phylogenetic Tree(s): OG0006035_tree ,
OG_05_0005488 (LandPlants) Phylogenetic Tree(s): OG_05_0005488_tree ,
OG_06_0005826 (SeedPlants) Phylogenetic Tree(s): OG_06_0005826_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00038p00236980 | |
| Cluster | HCCA: Cluster_259 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Mp2g03260.1 | No alias | transcription initiation factor (CCG/MEE12) | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000062 | fatty-acyl-CoA binding | IEP | Neighborhood |
| CC | GO:0000176 | nuclear exosome (RNase complex) | IEP | Neighborhood |
| CC | GO:0000178 | exosome (RNase complex) | IEP | Neighborhood |
| MF | GO:0001882 | nucleoside binding | IEP | Neighborhood |
| MF | GO:0001883 | purine nucleoside binding | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0003924 | GTPase activity | IEP | Neighborhood |
| MF | GO:0003950 | NAD+ ADP-ribosyltransferase activity | IEP | Neighborhood |
| MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Neighborhood |
| MF | GO:0004518 | nuclease activity | IEP | Neighborhood |
| MF | GO:0004527 | exonuclease activity | IEP | Neighborhood |
| MF | GO:0004540 | ribonuclease activity | IEP | Neighborhood |
| MF | GO:0004576 | oligosaccharyl transferase activity | IEP | Neighborhood |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Neighborhood |
| MF | GO:0004725 | protein tyrosine phosphatase activity | IEP | Neighborhood |
| MF | GO:0004871 | obsolete signal transducer activity | IEP | Neighborhood |
| MF | GO:0005525 | GTP binding | IEP | Neighborhood |
| CC | GO:0005737 | cytoplasm | IEP | Neighborhood |
| CC | GO:0005783 | endoplasmic reticulum | IEP | Neighborhood |
| BP | GO:0006396 | RNA processing | IEP | Neighborhood |
| BP | GO:0006470 | protein dephosphorylation | IEP | Neighborhood |
| BP | GO:0007165 | signal transduction | IEP | Neighborhood |
| BP | GO:0007186 | G-protein coupled receptor signaling pathway | IEP | Neighborhood |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Neighborhood |
| CC | GO:0016021 | integral component of membrane | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| BP | GO:0016073 | snRNA metabolic process | IEP | Neighborhood |
| BP | GO:0016180 | snRNA processing | IEP | Neighborhood |
| BP | GO:0016311 | dephosphorylation | IEP | Neighborhood |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Neighborhood |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Neighborhood |
| MF | GO:0016757 | transferase activity, transferring glycosyl groups | IEP | Neighborhood |
| MF | GO:0016763 | transferase activity, transferring pentosyl groups | IEP | Neighborhood |
| MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Neighborhood |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Neighborhood |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Neighborhood |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Neighborhood |
| BP | GO:0031123 | RNA 3'-end processing | IEP | Neighborhood |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Neighborhood |
| MF | GO:0031683 | G-protein beta/gamma-subunit complex binding | IEP | Neighborhood |
| MF | GO:0032549 | ribonucleoside binding | IEP | Neighborhood |
| MF | GO:0032550 | purine ribonucleoside binding | IEP | Neighborhood |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0033218 | amide binding | IEP | Neighborhood |
| BP | GO:0034472 | snRNA 3'-end processing | IEP | Neighborhood |
| BP | GO:0034477 | U6 snRNA 3'-end processing | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0043628 | ncRNA 3'-end processing | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044425 | membrane part | IEP | Neighborhood |
| MF | GO:0044877 | protein-containing complex binding | IEP | Neighborhood |
| MF | GO:0070001 | aspartic-type peptidase activity | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| MF | GO:1901567 | fatty acid derivative binding | IEP | Neighborhood |
| MF | GO:1901681 | sulfur compound binding | IEP | Neighborhood |
| CC | GO:1905354 | exoribonuclease complex | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |