1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00039p00107450

AMTR_s00039p00107450 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00039.61

Description : Cell wall.hemicellulose.xyloglucan.synthesis.UDP-galactose-dependent 1,2-beta-galactosyltransferase


Gene families : OG0000237 (Archaeplastida) Phylogenetic Tree(s): OG0000237_tree ,
OG_05_0000328 (LandPlants) Phylogenetic Tree(s): OG_05_0000328_tree ,
OG_06_0000980 (SeedPlants) Phylogenetic Tree(s): OG_06_0000980_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00039p00107450
Cluster HCCA: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
AT1G63450 RHS8 root hair specific 8 0.05 Archaeplastida
Gb_09780 No alias Xyloglucan galactosyltransferase MUR3 OS=Arabidopsis... 0.05 Archaeplastida
Gb_17818 No alias Probable xyloglucan galactosyltransferase GT11... 0.02 Archaeplastida
MA_10428118g0010 No alias Probable xyloglucan galactosyltransferase GT19... 0.02 Archaeplastida
MA_96103g0010 No alias Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.03 Archaeplastida
Pp3c18_14230V3.1 No alias Exostosin family protein 0.02 Archaeplastida
Pp3c1_25640V3.1 No alias root hair specific 8 0.02 Archaeplastida
Pp3c22_13750V3.1 No alias Exostosin family protein 0.03 Archaeplastida
Pp3c25_6620V3.1 No alias Exostosin family protein 0.03 Archaeplastida
Pp3c26_14140V3.1 No alias Exostosin family protein 0.02 Archaeplastida
Pp3c3_21190V3.1 No alias Exostosin family protein 0.03 Archaeplastida
Pp3c5_12240V3.1 No alias Exostosin family protein 0.02 Archaeplastida
Smo118133 No alias Probable xyloglucan galactosyltransferase GT11... 0.01 Archaeplastida
Smo79836 No alias Xyloglucan galactosyltransferase XLT2 OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo85769 No alias Probable xyloglucan galactosyltransferase GT11... 0.02 Archaeplastida
Solyc02g092840.1.1 No alias Xyloglucan galactosyltransferase XLT2 OS=Arabidopsis... 0.03 Archaeplastida
Solyc09g064470.3.1 No alias Xyloglucan galactosyltransferase MUR3 OS=Arabidopsis... 0.02 Archaeplastida
Solyc12g056260.1.1 No alias xyloglucan galacturonosyltransferase 0.03 Archaeplastida
Zm00001e000359_P001 No alias Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.03 Archaeplastida
Zm00001e000360_P001 No alias Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.03 Archaeplastida
Zm00001e000362_P001 No alias Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.03 Archaeplastida
Zm00001e004643_P001 No alias Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.03 Archaeplastida
Zm00001e004645_P001 No alias Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.03 Archaeplastida
Zm00001e004647_P001 No alias Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.03 Archaeplastida
Zm00001e017887_P001 No alias Probable xyloglucan galactosyltransferase GT11... 0.03 Archaeplastida
Zm00001e041419_P001 No alias Xyloglucan galactosyltransferase XLT2 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003756 protein disulfide isomerase activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004143 diacylglycerol kinase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0007154 cell communication IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Neighborhood
MF GO:0016972 thiol oxidase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004263 Exostosin 101 442
No external refs found!