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  5. AMTR_s00039p00194530

AMTR_s00039p00194530 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00039.158

Description : Phytohormones.abscisic acid.synthesis.neoxanthin cleavage protein


Gene families : OG0000267 (Archaeplastida) Phylogenetic Tree(s): OG0000267_tree ,
OG_05_0001191 (LandPlants) Phylogenetic Tree(s): OG_05_0001191_tree ,
OG_06_0001076 (SeedPlants) Phylogenetic Tree(s): OG_06_0001076_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00039p00194530
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00256600 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT3G14440 NCED3, SIS7,... nine-cis-epoxycarotenoid dioxygenase 3 0.06 Archaeplastida
AT4G18350 NCED2, ATNCED2 nine-cis-epoxycarotenoid dioxygenase 2 0.03 Archaeplastida
GSVIVT01029057001 No alias Phytohormones.abscisic acid.synthesis.neoxanthin cleavage protein 0.02 Archaeplastida
GSVIVT01038080001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.02 Archaeplastida
Gb_07367 No alias carotenoid cleavage dioxygenase (CCD4). neoxanthin... 0.02 Archaeplastida
Gb_14131 No alias carotenoid cleavage dioxygenase (CCD4). neoxanthin... 0.02 Archaeplastida
Gb_33716 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.03 Archaeplastida
LOC_Os02g47510.1 No alias carotenoid cleavage dioxygenase (CCD4) 0.02 Archaeplastida
LOC_Os03g44380.1 No alias neoxanthin cleavage protein 0.04 Archaeplastida
Mp8g04080.1 No alias Carotenoid 9,10(9,10)-cleavage dioxygenase 1 OS=Pisum... 0.02 Archaeplastida
Pp3c16_17210V3.1 No alias nine-cis-epoxycarotenoid dioxygenase 3 0.01 Archaeplastida
Solyc08g075480.4.1 No alias carotenoid cleavage dioxygenase (CCD4) 0.03 Archaeplastida
Zm00001e012402_P001 No alias neoxanthin cleavage protein 0.03 Archaeplastida
Zm00001e032833_P001 No alias neoxanthin cleavage protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004664 prephenate dehydratase activity IEP Neighborhood
BP GO:0006558 L-phenylalanine metabolic process IEP Neighborhood
BP GO:0009094 L-phenylalanine biosynthetic process IEP Neighborhood
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016832 aldehyde-lyase activity IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016841 ammonia-lyase activity IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Neighborhood
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 112 579
No external refs found!