AT1G48660

Description : Auxin-responsive GH3 family protein

Gene families : OG0000138 (Archaeplastida) Phylogenetic Tree(s): OG0000138_tree ,
OG_05_0000189 (LandPlants) Phylogenetic Tree(s): OG_05_0000189_tree ,
OG_06_0012938 (SeedPlants) Phylogenetic Tree(s): OG_06_0012938_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G48660
Cluster	HCCA: Cluster_28

Target	Alias	Description	ECC score	Gene Family Method
AT1G23160	No alias	Auxin-responsive GH3 family protein	0.07	Archaeplastida
AT1G59500	GH3.4	Auxin-responsive GH3 family protein	0.04	Archaeplastida
AT5G13370	No alias	Auxin-responsive GH3 family protein	0.03	Archaeplastida
AT5G51470	No alias	Auxin-responsive GH3 family protein	0.06	Archaeplastida
AT5G54510	DFL1, GH3.6	Auxin-responsive GH3 family protein	0.05	Archaeplastida
GSVIVT01027971001	No alias	Putative indole-3-acetic acid-amido synthetase GH3.9...	0.04	Archaeplastida
Gb_06148	No alias	Indole-3-acetic acid-amido synthetase GH3.17...	0.03	Archaeplastida
Gb_36596	No alias	Indole-3-acetic acid-amido synthetase GH3.17...	0.04	Archaeplastida
LOC_Os01g55940.1	No alias	indole-3-acetic acid-amido synthetase	0.03	Archaeplastida
LOC_Os05g42150.1	No alias	indole-3-acetic acid-amido synthetase	0.02	Archaeplastida
LOC_Os11g08340.1	No alias	Probable indole-3-acetic acid-amido synthetase GH3.12...	0.03	Archaeplastida
MA_100975g0010	No alias	Indole-3-acetic acid-amido synthetase GH3.6...	0.02	Archaeplastida
MA_212507g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
Smo119116	No alias	Indole-3-acetic acid-amido synthetase GH3.6...	0.03	Archaeplastida
Smo125443	No alias	Indole-3-acetic acid-amido synthetase GH3.10...	0.03	Archaeplastida
Smo432454	No alias	Indole-3-acetic acid-amido synthetase GH3.10...	0.02	Archaeplastida
Solyc00g500218.1.1	No alias	jasmonoyl-amino acid synthetase (JAR1)	0.03	Archaeplastida
Solyc10g009610.2.1	No alias	jasmonoyl-amino acid synthetase (JAR1)	0.03	Archaeplastida
Zm00001e016439_P001	No alias	No annotation	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	ISS	Interproscan
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050896	response to stimulus	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000295	adenine nucleotide transmembrane transporter activity	IEP	Neighborhood
BP	GO:0001101	response to acid chemical	IEP	Neighborhood
MF	GO:0003994	aconitate hydratase activity	IEP	Neighborhood
MF	GO:0004069	L-aspartate:2-oxoglutarate aminotransferase activity	IEP	Neighborhood
MF	GO:0004451	isocitrate lyase activity	IEP	Neighborhood
MF	GO:0004474	malate synthase activity	IEP	Neighborhood
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	Neighborhood
MF	GO:0004612	phosphoenolpyruvate carboxykinase (ATP) activity	IEP	Neighborhood
MF	GO:0005274	allantoin:proton symporter activity	IEP	Neighborhood
MF	GO:0005346	purine ribonucleotide transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005347	ATP transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005471	ATP:ADP antiporter activity	IEP	Neighborhood
MF	GO:0005496	steroid binding	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
CC	GO:0005777	peroxisome	IEP	Neighborhood
BP	GO:0006082	organic acid metabolic process	IEP	Neighborhood
BP	GO:0006094	gluconeogenesis	IEP	Neighborhood
BP	GO:0006101	citrate metabolic process	IEP	Neighborhood
BP	GO:0006102	isocitrate metabolic process	IEP	Neighborhood
BP	GO:0006508	proteolysis	IEP	Neighborhood
BP	GO:0006629	lipid metabolic process	IEP	Neighborhood
BP	GO:0006631	fatty acid metabolic process	IEP	Neighborhood
BP	GO:0006635	fatty acid beta-oxidation	IEP	Neighborhood
BP	GO:0006720	isoprenoid metabolic process	IEP	Neighborhood
BP	GO:0006721	terpenoid metabolic process	IEP	Neighborhood
BP	GO:0007031	peroxisome organization	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
MF	GO:0008233	peptidase activity	IEP	Neighborhood
MF	GO:0008234	cysteine-type peptidase activity	IEP	Neighborhood
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Neighborhood
BP	GO:0008610	lipid biosynthetic process	IEP	Neighborhood
BP	GO:0009056	catabolic process	IEP	Neighborhood
BP	GO:0009062	fatty acid catabolic process	IEP	Neighborhood
BP	GO:0009685	gibberellin metabolic process	IEP	Neighborhood
BP	GO:0009686	gibberellin biosynthetic process	IEP	Neighborhood
BP	GO:0009739	response to gibberellin	IEP	Neighborhood
BP	GO:0009740	gibberellic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009755	hormone-mediated signaling pathway	IEP	Neighborhood
BP	GO:0009756	carbohydrate mediated signaling	IEP	Neighborhood
MF	GO:0009815	1-aminocyclopropane-1-carboxylate oxidase activity	IEP	Neighborhood
BP	GO:0009830	cell wall modification involved in abscission	IEP	Neighborhood
BP	GO:0009845	seed germination	IEP	Neighborhood
BP	GO:0009887	animal organ morphogenesis	IEP	Neighborhood
BP	GO:0009933	meristem structural organization	IEP	Neighborhood
BP	GO:0009956	radial pattern formation	IEP	Neighborhood
BP	GO:0010038	response to metal ion	IEP	Neighborhood
BP	GO:0010039	response to iron ion	IEP	Neighborhood
BP	GO:0010162	seed dormancy process	IEP	Neighborhood
BP	GO:0010182	sugar mediated signaling pathway	IEP	Neighborhood
BP	GO:0010325	raffinose family oligosaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0010476	gibberellin mediated signaling pathway	IEP	Neighborhood
BP	GO:0010817	regulation of hormone levels	IEP	Neighborhood
MF	GO:0015116	sulfate transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015215	nucleotide transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015216	purine nucleotide transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015217	ADP transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015238	drug transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015301	anion:anion antiporter activity	IEP	Neighborhood
BP	GO:0015720	allantoin transport	IEP	Neighborhood
BP	GO:0016042	lipid catabolic process	IEP	Neighborhood
BP	GO:0016053	organic acid biosynthetic process	IEP	Neighborhood
BP	GO:0016054	organic acid catabolic process	IEP	Neighborhood
BP	GO:0016101	diterpenoid metabolic process	IEP	Neighborhood
BP	GO:0016102	diterpenoid biosynthetic process	IEP	Neighborhood
BP	GO:0016114	terpenoid biosynthetic process	IEP	Neighborhood
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Neighborhood
MF	GO:0016615	malate dehydrogenase activity	IEP	Neighborhood
MF	GO:0016829	lyase activity	IEP	Neighborhood
MF	GO:0016830	carbon-carbon lyase activity	IEP	Neighborhood
MF	GO:0016833	oxo-acid-lyase activity	IEP	Neighborhood
BP	GO:0019217	regulation of fatty acid metabolic process	IEP	Neighborhood
BP	GO:0019319	hexose biosynthetic process	IEP	Neighborhood
BP	GO:0019395	fatty acid oxidation	IEP	Neighborhood
BP	GO:0019752	carboxylic acid metabolic process	IEP	Neighborhood
BP	GO:0019915	lipid storage	IEP	Neighborhood
BP	GO:0022611	dormancy process	IEP	Neighborhood
BP	GO:0030258	lipid modification	IEP	Neighborhood
BP	GO:0031329	regulation of cellular catabolic process	IEP	Neighborhood
BP	GO:0031998	regulation of fatty acid beta-oxidation	IEP	Neighborhood
BP	GO:0032365	intracellular lipid transport	IEP	Neighborhood
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Neighborhood
MF	GO:0032934	sterol binding	IEP	Neighborhood
BP	GO:0033993	response to lipid	IEP	Neighborhood
BP	GO:0034440	lipid oxidation	IEP	Neighborhood
BP	GO:0040019	positive regulation of embryonic development	IEP	Neighborhood
BP	GO:0042445	hormone metabolic process	IEP	Neighborhood
BP	GO:0042446	hormone biosynthetic process	IEP	Neighborhood
CC	GO:0042579	microbody	IEP	Neighborhood
BP	GO:0043436	oxoacid metabolic process	IEP	Neighborhood
BP	GO:0044238	primary metabolic process	IEP	Neighborhood
BP	GO:0044242	cellular lipid catabolic process	IEP	Neighborhood
BP	GO:0044248	cellular catabolic process	IEP	Neighborhood
BP	GO:0044255	cellular lipid metabolic process	IEP	Neighborhood
BP	GO:0044277	cell wall disassembly	IEP	Neighborhood
BP	GO:0044281	small molecule metabolic process	IEP	Neighborhood
BP	GO:0044282	small molecule catabolic process	IEP	Neighborhood
BP	GO:0044283	small molecule biosynthetic process	IEP	Neighborhood
MF	GO:0045551	cinnamyl-alcohol dehydrogenase activity	IEP	Neighborhood
BP	GO:0045995	regulation of embryonic development	IEP	Neighborhood
BP	GO:0046320	regulation of fatty acid oxidation	IEP	Neighborhood
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Neighborhood
BP	GO:0046395	carboxylic acid catabolic process	IEP	Neighborhood
BP	GO:0046487	glyoxylate metabolic process	IEP	Neighborhood
MF	GO:0046912	transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	IEP	Neighborhood
BP	GO:0048532	anatomical structure arrangement	IEP	Neighborhood
BP	GO:0048579	negative regulation of long-day photoperiodism, flowering	IEP	Neighborhood
BP	GO:0048586	regulation of long-day photoperiodism, flowering	IEP	Neighborhood
BP	GO:0048609	multicellular organismal reproductive process	IEP	Neighborhood
BP	GO:0050826	response to freezing	IEP	Neighborhood
BP	GO:0050994	regulation of lipid catabolic process	IEP	Neighborhood
BP	GO:0051235	maintenance of location	IEP	Neighborhood
BP	GO:0060771	phyllotactic patterning	IEP	Neighborhood
BP	GO:0060772	leaf phyllotactic patterning	IEP	Neighborhood
BP	GO:0060774	auxin mediated signaling pathway involved in phyllotactic patterning	IEP	Neighborhood
BP	GO:0065008	regulation of biological quality	IEP	Neighborhood
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Neighborhood
BP	GO:0070542	response to fatty acid	IEP	Neighborhood
BP	GO:0071398	cellular response to fatty acid	IEP	Neighborhood
BP	GO:0071704	organic substance metabolic process	IEP	Neighborhood
BP	GO:0071731	response to nitric oxide	IEP	Neighborhood
BP	GO:0071732	cellular response to nitric oxide	IEP	Neighborhood
BP	GO:0072329	monocarboxylic acid catabolic process	IEP	Neighborhood
BP	GO:0072350	tricarboxylic acid metabolic process	IEP	Neighborhood
BP	GO:0080093	regulation of photorespiration	IEP	Neighborhood
BP	GO:0080167	response to karrikin	IEP	Neighborhood
BP	GO:0097366	response to bronchodilator	IEP	Neighborhood
BP	GO:1901575	organic substance catabolic process	IEP	Neighborhood
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	Neighborhood
BP	GO:1902170	cellular response to reactive nitrogen species	IEP	Neighborhood
BP	GO:2000028	regulation of photoperiodism, flowering	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004993	GH3	10	549

External Links

No external refs found!

AT1G48660

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation