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  5. GSVIVT01024107001

GSVIVT01024107001


Description : Type III polyketide synthase B OS=Arabidopsis thaliana


Gene families : OG0005376 (Archaeplastida) Phylogenetic Tree(s): OG0005376_tree ,
OG_05_0003653 (LandPlants) Phylogenetic Tree(s): OG_05_0003653_tree ,
OG_06_0003565 (SeedPlants) Phylogenetic Tree(s): OG_06_0003565_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01024107001
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00033190 evm_27.TU.AmTr_v1... Cell wall.sporopollenin.synthesis.hydroxyalkyl... 0.07 Archaeplastida
AMTR_s00182p00053650 evm_27.TU.AmTr_v1... Cell wall.sporopollenin.synthesis.hydroxyalkyl... 0.07 Archaeplastida
AT1G02050 LAP6 Chalcone and stilbene synthase family protein 0.1 Archaeplastida
AT4G00040 No alias Chalcone and stilbene synthase family protein 0.04 Archaeplastida
AT4G34850 LAP5 Chalcone and stilbene synthase family protein 0.11 Archaeplastida
Gb_02579 No alias hydroxyalkyl alpha-pyrone synthase 0.05 Archaeplastida
LOC_Os07g22850.1 No alias hydroxyalkyl alpha-pyrone synthase 0.07 Archaeplastida
LOC_Os10g34360.1 No alias hydroxyalkyl alpha-pyrone synthase 0.09 Archaeplastida
MA_4931944g0010 No alias Type III polyketide synthase A OS=Arabidopsis thaliana... 0.06 Archaeplastida
MA_619670g0010 No alias Type III polyketide synthase B OS=Arabidopsis thaliana... 0.06 Archaeplastida
Pp3c2_32960V3.1 No alias Chalcone and stilbene synthase family protein 0.07 Archaeplastida
Smo122361 No alias Cell wall.sporopollenin.synthesis.hydroxyalkyl... 0.02 Archaeplastida
Solyc01g090600.4.1 No alias Type III polyketide synthase A OS=Arabidopsis thaliana... 0.1 Archaeplastida
Solyc01g111070.3.1 No alias hydroxyalkyl alpha-pyrone synthase 0.11 Archaeplastida
Zm00001e004538_P001 No alias hydroxyalkyl alpha-pyrone synthase 0.1 Archaeplastida
Zm00001e012647_P001 No alias hydroxyalkyl alpha-pyrone synthase 0.12 Archaeplastida
Zm00001e033354_P001 No alias hydroxyalkyl alpha-pyrone synthase 0.11 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003756 protein disulfide isomerase activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006094 gluconeogenesis IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Neighborhood
BP GO:0019319 hexose biosynthetic process IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
BP GO:0046364 monosaccharide biosynthetic process IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR012328 Chalcone/stilbene_synth_C 153 197
IPR012328 Chalcone/stilbene_synth_C 198 282
IPR001099 Chalcone/stilbene_synthase_N 13 93
IPR001099 Chalcone/stilbene_synthase_N 99 143
No external refs found!