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  5. GSVIVT01030628001

GSVIVT01030628001


Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.BBX/CONSTANS transcription factor


Gene families : OG0000948 (Archaeplastida) Phylogenetic Tree(s): OG0000948_tree ,
OG_05_0001459 (LandPlants) Phylogenetic Tree(s): OG_05_0001459_tree ,
OG_06_0001518 (SeedPlants) Phylogenetic Tree(s): OG_06_0001518_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01030628001
Cluster HCCA: Cluster_401

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01014591001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
MA_5067g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_90307g0010 No alias transcription factor (BBX-CO) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR010402 CCT_domain 282 324
No external refs found!