1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01031446001

GSVIVT01031446001


Description : RNA biosynthesis.transcriptional activation.PLATZ transcription factor


Gene families : OG0000197 (Archaeplastida) Phylogenetic Tree(s): OG0000197_tree ,
OG_05_0000533 (LandPlants) Phylogenetic Tree(s): OG_05_0000533_tree ,
OG_06_0014679 (SeedPlants) Phylogenetic Tree(s): OG_06_0014679_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031446001
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00211460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.04 Archaeplastida
AMTR_s00008p00208550 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.03 Archaeplastida
AMTR_s00033p00166000 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.04 Archaeplastida
AT2G12646 No alias PLATZ transcription factor family protein 0.05 Archaeplastida
GSVIVT01012869001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.04 Archaeplastida
Gb_29488 No alias transcription factor (PLATZ) 0.02 Archaeplastida
LOC_Os02g09070.1 No alias transcription factor (PLATZ) 0.03 Archaeplastida
LOC_Os02g46610.1 No alias transcription factor (PLATZ) 0.03 Archaeplastida
LOC_Os04g50120.1 No alias transcription factor (PLATZ) 0.02 Archaeplastida
LOC_Os08g44620.1 No alias transcription factor (PLATZ) 0.02 Archaeplastida
MA_12209g0020 No alias transcription factor (PLATZ) 0.04 Archaeplastida
MA_8256450g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_8773709g0010 No alias transcription factor (PLATZ) 0.03 Archaeplastida
Mp3g06190.1 No alias transcription factor (PLATZ) 0.02 Archaeplastida
Pp3c18_12270V3.1 No alias PLATZ transcription factor family protein 0.02 Archaeplastida
Smo425306 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.02 Archaeplastida
Solyc07g007320.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc12g010470.3.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e013748_P001 No alias transcription factor (PLATZ) 0.02 Archaeplastida
Zm00001e037743_P001 No alias transcription factor (PLATZ) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003756 protein disulfide isomerase activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006094 gluconeogenesis IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Neighborhood
BP GO:0019319 hexose biosynthetic process IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
BP GO:0046364 monosaccharide biosynthetic process IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR006734 DUF597 60 132
No external refs found!