Cre01.g030850

Description : Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-4 component

Gene families : OG0003804 (Archaeplastida) Phylogenetic Tree(s): OG0003804_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre01.g030850
Cluster	HCCA: Cluster_50

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00062p00097510	evm_27.TU.AmTr_v1...	Protein degradation.26S proteasome.20S core...	0.05	Archaeplastida
AT3G51260	PAD1	20S proteasome alpha subunit PAD1	0.29	Archaeplastida
AT5G66140	PAD2	proteasome alpha subunit D2	0.02	Archaeplastida
Cpa\|evm.model.tig00020830.84	No alias	Protein degradation.26S proteasome.20S core...	0.13	Archaeplastida
GSVIVT01018748001	No alias	Protein degradation.26S proteasome.20S core...	0.02	Archaeplastida
GSVIVT01024037001	No alias	Protein degradation.26S proteasome.20S core...	0.06	Archaeplastida
Gb_06267	No alias	component alpha type-4 of 26S proteasome	0.05	Archaeplastida
LOC_Os08g43540.1	No alias	component alpha type-4 of 26S proteasome	0.03	Archaeplastida
LOC_Os09g36710.1	No alias	component alpha type-4 of 26S proteasome	0.1	Archaeplastida
MA_10436167g0010	No alias	component alpha type-4 of 26S proteasome	0.08	Archaeplastida
Mp6g07820.1	No alias	component alpha type-4 of 26S proteasome	0.15	Archaeplastida
Pp3c18_9650V3.1	No alias	proteasome alpha subunit D2	0.12	Archaeplastida
Pp3c19_7610V3.1	No alias	proteasome alpha subunit D2	0.01	Archaeplastida
Pp3c21_8390V3.1	No alias	proteasome alpha subunit D2	0.02	Archaeplastida
Solyc01g111450.3.1	No alias	component alpha type-4 of 26S proteasome	0.21	Archaeplastida
Zm00001e010250_P002	No alias	component alpha type-4 of 26S proteasome	0.02	Archaeplastida
Zm00001e035996_P001	No alias	component alpha type-4 of 26S proteasome	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004298	threonine-type endopeptidase activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005839	proteasome core complex	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEA	Interproscan
MF	GO:0070003	threonine-type peptidase activity	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000502	proteasome complex	IEP	Neighborhood
MF	GO:0003684	damaged DNA binding	IEP	Neighborhood
MF	GO:0003779	actin binding	IEP	Neighborhood
CC	GO:0005783	endoplasmic reticulum	IEP	Neighborhood
CC	GO:0005787	signal peptidase complex	IEP	Neighborhood
BP	GO:0006289	nucleotide-excision repair	IEP	Neighborhood
BP	GO:0006465	signal peptide processing	IEP	Neighborhood
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Neighborhood
BP	GO:0007010	cytoskeleton organization	IEP	Neighborhood
BP	GO:0009056	catabolic process	IEP	Neighborhood
BP	GO:0009057	macromolecule catabolic process	IEP	Neighborhood
BP	GO:0009894	regulation of catabolic process	IEP	Neighborhood
BP	GO:0010498	proteasomal protein catabolic process	IEP	Neighborhood
BP	GO:0016043	cellular component organization	IEP	Neighborhood
BP	GO:0016485	protein processing	IEP	Neighborhood
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	Neighborhood
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Neighborhood
BP	GO:0030163	protein catabolic process	IEP	Neighborhood
CC	GO:0030176	integral component of endoplasmic reticulum membrane	IEP	Neighborhood
CC	GO:0031227	intrinsic component of endoplasmic reticulum membrane	IEP	Neighborhood
BP	GO:0042176	regulation of protein catabolic process	IEP	Neighborhood
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	IEP	Neighborhood
BP	GO:0043248	proteasome assembly	IEP	Neighborhood
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Neighborhood
BP	GO:0044248	cellular catabolic process	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044265	cellular macromolecule catabolic process	IEP	Neighborhood
CC	GO:0044432	endoplasmic reticulum part	IEP	Neighborhood
CC	GO:0044444	cytoplasmic part	IEP	Neighborhood
BP	GO:0051246	regulation of protein metabolic process	IEP	Neighborhood
BP	GO:0051604	protein maturation	IEP	Neighborhood
BP	GO:0071840	cellular component organization or biogenesis	IEP	Neighborhood
BP	GO:1901565	organonitrogen compound catabolic process	IEP	Neighborhood
BP	GO:1901575	organic substance catabolic process	IEP	Neighborhood
CC	GO:1902494	catalytic complex	IEP	Neighborhood
CC	GO:1905368	peptidase complex	IEP	Neighborhood
CC	GO:1905369	endopeptidase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000426	Proteasome_asu_N	5	27
IPR001353	Proteasome_sua/b	28	209

External Links

No external refs found!

Cre01.g030850

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation