1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre02.g086887

Cre02.g086887


Description : Nuclear pore complex protein NUP98A OS=Arabidopsis thaliana


Gene families : OG0001288 (Archaeplastida) Phylogenetic Tree(s): OG0001288_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre02.g086887
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AT1G80680 NUP96, PRE, SAR3, MOS3 SUPPRESSOR OF AUXIN RESISTANCE 3 0.05 Archaeplastida
GSVIVT01019716001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 Archaeplastida
Gb_29033 No alias NUP96 scaffold nucleoporin of nuclear pore complex 0.03 Archaeplastida
LOC_Os03g07580.1 No alias NUP96 scaffold nucleoporin of nuclear pore complex 0.03 Archaeplastida
LOC_Os12g06890.1 No alias NUP98 nucleoporin of nuclear pore complex 0.02 Archaeplastida
MA_10427433g0010 No alias Nuclear pore complex protein NUP98A OS=Arabidopsis... 0.02 Archaeplastida
MA_548894g0010 No alias Nuclear pore complex protein NUP98A OS=Arabidopsis... 0.01 Archaeplastida
MA_62342g0010 No alias NUP98 nucleoporin of nuclear pore complex 0.03 Archaeplastida
Mp2g01050.1 No alias NUP96 scaffold nucleoporin of nuclear pore complex.... 0.03 Archaeplastida
Pp3c26_7720V3.1 No alias SUPPRESSOR OF AUXIN RESISTANCE 3 0.02 Archaeplastida
Solyc03g117120.4.1 No alias NUP96 scaffold nucleoporin of nuclear pore complex 0.04 Archaeplastida
Solyc04g007280.3.1 No alias NUP98 nucleoporin of nuclear pore complex 0.05 Archaeplastida
Zm00001e038897_P001 No alias NUP96 scaffold nucleoporin of nuclear pore complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEA Interproscan
BP GO:0006913 nucleocytoplasmic transport IEA Interproscan
MF GO:0017056 structural constituent of nuclear pore IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
InterPro domains Description Start Stop
IPR007230 Peptidase_S59 885 1031
IPR021967 Nup96 1747 2103
No external refs found!