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  5. Cre06.g292650

Cre06.g292650


No description available


Gene families : OG0001277 (Archaeplastida) Phylogenetic Tree(s): OG0001277_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g292650
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01007806001 No alias No description available 0.01 Archaeplastida
Gb_05690 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_16486 No alias no hits & (original description: none) 0.01 Archaeplastida
Gb_20760 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g50840.2 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os02g50850.2 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10432920g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_24475g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_39143g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp4g16160.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp4g16230.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c11_22570V3.1 No alias BAH domain ;TFIIS helical bundle-like domain 0.02 Archaeplastida
Pp3c7_2900V3.1 No alias BAH domain ;TFIIS helical bundle-like domain 0.02 Archaeplastida
Smo440870 No alias No description available 0.01 Archaeplastida
Solyc06g071350.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e002441_P003 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e037792_P001 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e037793_P001 No alias no hits & (original description: none) 0.01 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003714 transcription corepressor activity IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR017923 TFIIS_N 408 454
No external refs found!