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  5. Cre06.g304300

Cre06.g304300


Description : Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-6 component


Gene families : OG0004156 (Archaeplastida) Phylogenetic Tree(s): OG0004156_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g304300
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AT1G47250 PAF2 20S proteasome alpha subunit F2 0.09 Archaeplastida
AT5G42790 ARS5, PAF1, ATPSM30 proteasome alpha subunit F1 0.02 Archaeplastida
Cpa|evm.model.tig00000217.21 No alias Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.12 Archaeplastida
GSVIVT01009737001 No alias Protein degradation.26S proteasome.20S core... 0.05 Archaeplastida
Gb_26474 No alias component alpha type-6 of 26S proteasome 0.05 Archaeplastida
LOC_Os02g04100.1 No alias component alpha type-6 of 26S proteasome 0.11 Archaeplastida
MA_10143842g0010 No alias Proteasome subunit alpha type-1-B OS=Arabidopsis... 0.07 Archaeplastida
MA_45005g0010 No alias Proteasome subunit alpha type-1-B OS=Arabidopsis... 0.04 Archaeplastida
MA_713708g0010 No alias Proteasome subunit alpha type-1-A OS=Arabidopsis... 0.02 Archaeplastida
Mp4g13080.1 No alias component alpha type-6 of 26S proteasome 0.13 Archaeplastida
Pp3c16_23890V3.1 No alias 20S proteasome alpha subunit F2 0.02 Archaeplastida
Pp3c25_15330V3.1 No alias proteasome alpha subunit F1 0.01 Archaeplastida
Smo158876 No alias Protein degradation.26S proteasome.20S core... 0.04 Archaeplastida
Solyc04g080590.4.1 No alias component alpha type-6 of 26S proteasome 0.11 Archaeplastida
Zm00001e013585_P001 No alias component alpha type-6 of 26S proteasome 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP Neighborhood
CC GO:0001401 mitochondrial sorting and assembly machinery complex IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Neighborhood
MF GO:0004827 proline-tRNA ligase activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005787 signal peptidase complex IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0006433 prolyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006465 signal peptide processing IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009894 regulation of catabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010498 proteasomal protein catabolic process IEP Neighborhood
MF GO:0016229 steroid dehydrogenase activity IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0042176 regulation of protein catabolic process IEP Neighborhood
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098799 outer mitochondrial membrane protein complex IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
CC GO:1905369 endopeptidase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 4 189
No external refs found!