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  5. Cre09.g402450

Cre09.g402450


Description : Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT3 regulatory component


Gene families : OG0002892 (Archaeplastida) Phylogenetic Tree(s): OG0002892_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre09.g402450
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00161980 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.regulatory... 0.02 Archaeplastida
AT5G58290 RPT3 regulatory particle triple-A ATPase 3 0.05 Archaeplastida
Cpa|evm.model.tig00022075.46 No alias 26S proteasome regulatory subunit 6B homolog... 0.08 Archaeplastida
LOC_Os02g21970.1 No alias regulatory component RPT3 of 26S proteasome 0.13 Archaeplastida
MA_13350g0010 No alias 26S proteasome regulatory subunit 6B homolog... 0.03 Archaeplastida
Mp8g10830.1 No alias regulatory component RPT3 of 26S proteasome 0.08 Archaeplastida
Smo163630 No alias Protein degradation.26S proteasome.regulatory... 0.02 Archaeplastida
Smo180600 No alias Protein degradation.26S proteasome.regulatory... 0.04 Archaeplastida
Solyc06g082630.4.1 No alias regulatory component RPT3 of 26S proteasome 0.05 Archaeplastida
Solyc06g082660.4.1 No alias regulatory component RPT3 of 26S proteasome 0.03 Archaeplastida
Zm00001e014107_P001 No alias regulatory component RPT3 of 26S proteasome 0.06 Archaeplastida
Zm00001e022619_P001 No alias regulatory component RPT3 of 26S proteasome 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 198 330
IPR032501 Prot_ATP_ID_OB 85 140
No external refs found!