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  5. Cre12.g516200

Cre12.g516200


Description : Protein biosynthesis.translation elongation.eEF2 mRNA-translocation factor


Gene families : OG0001511 (Archaeplastida) Phylogenetic Tree(s): OG0001511_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g516200
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00133570 evm_27.TU.AmTr_v1... Protein biosynthesis.translation elongation.eEF2... 0.03 Archaeplastida
AT1G56070 LOS1 Ribosomal protein S5/Elongation factor G/III/V family protein 0.06 Archaeplastida
Cpa|evm.model.tig00021464.39 No alias Protein biosynthesis.translation elongation.eEF2... 0.05 Archaeplastida
Gb_02896 No alias mRNA-translocation factor (eEF2) 0.02 Archaeplastida
Gb_14897 No alias mRNA-translocation factor (eEF2) 0.05 Archaeplastida
LOC_Os02g32030.1 No alias mRNA-translocation factor (eEF2) 0.04 Archaeplastida
LOC_Os04g02820.1 No alias mRNA-translocation factor (eEF2) 0.04 Archaeplastida
MA_10426758g0020 No alias Elongation factor 2 OS=Beta vulgaris... 0.02 Archaeplastida
Mp2g20190.1 No alias mRNA-translocation factor (eEF2) 0.07 Archaeplastida
Mp2g20200.1 No alias mRNA-translocation factor (eEF2) 0.07 Archaeplastida
Pp3c11_25350V3.1 No alias Ribosomal protein S5/Elongation factor G/III/V family protein 0.05 Archaeplastida
Pp3c7_1950V3.1 No alias Ribosomal protein S5/Elongation factor G/III/V family protein 0.02 Archaeplastida
Solyc08g062910.4.1 No alias mRNA-translocation factor (eEF2) 0.03 Archaeplastida
Solyc08g062920.3.1 No alias mRNA-translocation factor (eEF2) 0.05 Archaeplastida
Zm00001e006293_P001 No alias mRNA-translocation factor (eEF2) 0.09 Archaeplastida
Zm00001e006294_P001 No alias mRNA-translocation factor (eEF2) 0.09 Archaeplastida
Zm00001e029078_P002 No alias mRNA-translocation factor (eEF2) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
BP GO:0001505 regulation of neurotransmitter levels IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004019 adenylosuccinate synthase activity IEP Neighborhood
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP Neighborhood
MF GO:0004455 ketol-acid reductoisomerase activity IEP Neighborhood
MF GO:0004592 pantoate-beta-alanine ligase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0004814 arginine-tRNA ligase activity IEP Neighborhood
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006420 arginyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006544 glycine metabolic process IEP Neighborhood
BP GO:0006546 glycine catabolic process IEP Neighborhood
BP GO:0006553 lysine metabolic process IEP Neighborhood
BP GO:0006575 cellular modified amino acid metabolic process IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009071 serine family amino acid catabolic process IEP Neighborhood
BP GO:0009081 branched-chain amino acid metabolic process IEP Neighborhood
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Neighborhood
BP GO:0009085 lysine biosynthetic process IEP Neighborhood
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015939 pantothenate metabolic process IEP Neighborhood
BP GO:0015940 pantothenate biosynthetic process IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016881 acid-amino acid ligase activity IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
MF GO:0031369 translation initiation factor binding IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
BP GO:0042133 neurotransmitter metabolic process IEP Neighborhood
BP GO:0042135 neurotransmitter catabolic process IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0043648 dicarboxylic acid metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
BP GO:0046451 diaminopimelate metabolic process IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000795 TF_GTP-bd_dom 17 344
IPR004161 EFTu-like_2 396 470
IPR000640 EFG_V-like 726 813
IPR005517 Transl_elong_EFG/EF2_IV 611 724
No external refs found!