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  4. Sequence
  5. Cre16.g694208

Cre16.g694208


No description available


Gene families : OG0000311 (Archaeplastida) Phylogenetic Tree(s): OG0000311_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g694208
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00203500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.01 Archaeplastida
AMTR_s00140p00029580 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.03 Archaeplastida
AMTR_s00146p00080830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.01 Archaeplastida
AT1G05380 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.02 Archaeplastida
AT2G27980 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.06 Archaeplastida
AT2G36720 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.02 Archaeplastida
AT4G14920 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.02 Archaeplastida
GSVIVT01014219001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.03 Archaeplastida
GSVIVT01017972001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.05 Archaeplastida
GSVIVT01031451001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.02 Archaeplastida
GSVIVT01031452001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.01 Archaeplastida
GSVIVT01033711001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.01 Archaeplastida
GSVIVT01038484001 No alias No description available 0.01 Archaeplastida
Gb_06644 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.02 Archaeplastida
Gb_10246 No alias PHD finger transcription factor 0.01 Archaeplastida
Gb_41247 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.02 Archaeplastida
LOC_Os03g53630.1 No alias PHD finger transcription factor 0.01 Archaeplastida
LOC_Os04g59510.1 No alias PHD finger transcription factor 0.03 Archaeplastida
LOC_Os06g01170.1 No alias PHD finger transcription factor 0.02 Archaeplastida
LOC_Os07g07690.1 No alias PHD finger transcription factor 0.02 Archaeplastida
MA_139275g0010 No alias PHD finger transcription factor 0.02 Archaeplastida
MA_14500g0010 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.05 Archaeplastida
MA_3931g0010 No alias PHD finger transcription factor 0.05 Archaeplastida
Mp2g04330.1 No alias PHD finger transcription factor 0.03 Archaeplastida
Mp6g21090.2 No alias PHD finger transcription factor 0.02 Archaeplastida
Pp3c10_7690V3.1 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.02 Archaeplastida
Pp3c14_7890V3.1 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.02 Archaeplastida
Pp3c1_22210V3.1 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.03 Archaeplastida
Pp3c25_4970V3.1 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.05 Archaeplastida
Pp3c25_9550V3.1 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.07 Archaeplastida
Solyc09g065340.3.1 No alias PHD finger transcription factor 0.01 Archaeplastida
Solyc09g076010.3.1 No alias PHD finger transcription factor 0.03 Archaeplastida
Solyc10g083800.2.1 No alias PHD finger transcription factor 0.01 Archaeplastida
Solyc10g084650.3.1 No alias PHD finger transcription factor 0.02 Archaeplastida
Solyc11g066480.2.1 No alias PHD finger transcription factor 0.03 Archaeplastida
Zm00001e005667_P001 No alias PHD finger transcription factor 0.07 Archaeplastida
Zm00001e012046_P003 No alias PHD finger transcription factor 0.01 Archaeplastida
Zm00001e013368_P001 No alias PHD finger transcription factor 0.03 Archaeplastida
Zm00001e032904_P002 No alias PHD finger transcription factor 0.05 Archaeplastida
Zm00001e042012_P001 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003714 transcription corepressor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0017056 structural constituent of nuclear pore IEP Neighborhood
CC GO:0031082 BLOC complex IEP Neighborhood
CC GO:0031083 BLOC-1 complex IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044445 cytosolic part IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR028941 WHIM2_dom 1256 1484
No external refs found!