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  5. Cre17.g705400

Cre17.g705400


Description : Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-1 component


Gene families : OG0002876 (Archaeplastida) Phylogenetic Tree(s): OG0002876_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre17.g705400
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00147p00090390 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.20S core... 0.05 Archaeplastida
AT2G05840 PAA2 20S proteasome subunit PAA2 0.04 Archaeplastida
AT5G35590 PAA1 proteasome alpha subunit A1 0.11 Archaeplastida
Cpa|evm.model.tig00001160.15 No alias Protein degradation.26S proteasome.20S core... 0.14 Archaeplastida
GSVIVT01016731001 No alias Protein degradation.26S proteasome.20S core... 0.11 Archaeplastida
Gb_32855 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_32856 No alias component alpha type-1 of 26S proteasome 0.06 Archaeplastida
LOC_Os03g08280.1 No alias component alpha type-1 of 26S proteasome 0.12 Archaeplastida
MA_219563g0010 No alias Proteasome subunit alpha type-6 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Mp3g08330.1 No alias component alpha type-1 of 26S proteasome 0.13 Archaeplastida
Pp3c24_20680V3.1 No alias proteasome alpha subunit A1 0.04 Archaeplastida
Pp3c2_5060V3.1 No alias proteasome alpha subunit A1 0.02 Archaeplastida
Pp3c7_22140V3.1 No alias proteasome alpha subunit A1 0.01 Archaeplastida
Pp3c8_24770V3.1 No alias proteasome alpha subunit A1 0.02 Archaeplastida
Smo272088 No alias Protein degradation.26S proteasome.20S core... 0.04 Archaeplastida
Solyc12g009140.3.1 No alias component alpha type-1 of 26S proteasome 0.09 Archaeplastida
Zm00001e000584_P001 No alias component alpha type-1 of 26S proteasome 0.12 Archaeplastida
Zm00001e038868_P001 No alias component alpha type-1 of 26S proteasome 0.12 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
CC GO:0000502 proteasome complex IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005787 signal peptidase complex IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0006465 signal peptide processing IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0009894 regulation of catabolic process IEP Neighborhood
BP GO:0010498 proteasomal protein catabolic process IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0042176 regulation of protein catabolic process IEP Neighborhood
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
CC GO:1905369 endopeptidase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 35 219
IPR000426 Proteasome_asu_N 8 30
No external refs found!