AT1G52240 (ATROPGEF11, ROPGEF11, PIRF1)

Aliases : ATROPGEF11, ROPGEF11, PIRF1

Description : RHO guanyl-nucleotide exchange factor 11

Gene families : OG0000251 (Archaeplastida) Phylogenetic Tree(s): OG0000251_tree ,
OG_05_0001518 (LandPlants) Phylogenetic Tree(s): OG_05_0001518_tree ,
OG_06_0000896 (SeedPlants) Phylogenetic Tree(s): OG_06_0000896_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G52240
Cluster	HCCA: Cluster_155

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00109p00064220	evm_27.TU.AmTr_v1...	Multi-process regulation.Rop GTPase regulatory...	0.12	Archaeplastida
AT1G79860	ROPGEF12, MEE64,...	RHO guanyl-nucleotide exchange factor 12	0.09	Archaeplastida
AT3G16130	PIRF2, ROPGEF13,...	RHO guanyl-nucleotide exchange factor 13	0.04	Archaeplastida
GSVIVT01015369001	No alias	Multi-process regulation.Rop GTPase regulatory...	0.09	Archaeplastida
GSVIVT01017070001	No alias	Multi-process regulation.Rop GTPase regulatory...	0.06	Archaeplastida
Gb_14425	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.04	Archaeplastida
LOC_Os01g48410.1	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.08	Archaeplastida
LOC_Os01g55520.1	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.08	Archaeplastida
LOC_Os02g17240.1	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.06	Archaeplastida
LOC_Os05g38000.1	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.03	Archaeplastida
LOC_Os05g48640.1	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.04	Archaeplastida
LOC_Os07g29780.2	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.04	Archaeplastida
Solyc03g120650.4.1	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.1	Archaeplastida
Solyc07g032730.4.1	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.06	Archaeplastida
Solyc12g007150.3.1	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.06	Archaeplastida
Solyc12g044270.2.1	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.1	Archaeplastida
Zm00001e014205_P002	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.06	Archaeplastida
Zm00001e015569_P002	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.02	Archaeplastida
Zm00001e019750_P001	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.06	Archaeplastida
Zm00001e020182_P002	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.06	Archaeplastida
Zm00001e024760_P001	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.08	Archaeplastida
Zm00001e026517_P004	No alias	PRONE-type RopGEF guanine nucleotide exchange factor	0.1	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000226	microtubule cytoskeleton organization	RCA	Interproscan
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005085	guanyl-nucleotide exchange factor activity	None	Extended
MF	GO:0005088	Ras guanyl-nucleotide exchange factor activity	None	Extended
MF	GO:0005089	Rho guanyl-nucleotide exchange factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005737	cytoplasm	IDA	Interproscan
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	None	Extended
BP	GO:0007017	microtubule-based process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009826	unidimensional cell growth	None	Extended
BP	GO:0009860	pollen tube growth	RCA	Interproscan
BP	GO:0009932	cell tip growth	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
MF	GO:0017016	Ras GTPase binding	None	Extended
MF	GO:0017048	Rho GTPase binding	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
BP	GO:0022414	reproductive process	None	Extended
MF	GO:0031267	small GTPase binding	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032989	cellular component morphogenesis	None	Extended
BP	GO:0040007	growth	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0048364	root development	IMP	Interproscan
BP	GO:0048468	cell development	None	Extended
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
MF	GO:0051020	GTPase binding	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080147	root hair cell development	IMP	Interproscan
MF	GO:0098772	molecular function regulator	None	Extended
BP	GO:0099402	plant organ development	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0001558	regulation of cell growth	IEP	Neighborhood
MF	GO:0001882	nucleoside binding	IEP	Neighborhood
MF	GO:0001883	purine nucleoside binding	IEP	Neighborhood
BP	GO:0002238	response to molecule of fungal origin	IEP	Neighborhood
MF	GO:0003779	actin binding	IEP	Neighborhood
MF	GO:0004143	diacylglycerol kinase activity	IEP	Neighborhood
MF	GO:0004565	beta-galactosidase activity	IEP	Neighborhood
MF	GO:0004712	protein serine/threonine/tyrosine kinase activity	IEP	Neighborhood
MF	GO:0004857	enzyme inhibitor activity	IEP	Neighborhood
MF	GO:0004871	obsolete signal transducer activity	IEP	Neighborhood
MF	GO:0005451	monovalent cation:proton antiporter activity	IEP	Neighborhood
MF	GO:0005525	GTP binding	IEP	Neighborhood
MF	GO:0005548	phospholipid transporter activity	IEP	Neighborhood
CC	GO:0005856	cytoskeleton	IEP	Neighborhood
CC	GO:0005886	plasma membrane	IEP	Neighborhood
BP	GO:0006814	sodium ion transport	IEP	Neighborhood
BP	GO:0006928	movement of cell or subcellular component	IEP	Neighborhood
BP	GO:0007186	G-protein coupled receptor signaling pathway	IEP	Neighborhood
BP	GO:0007205	protein kinase C-activating G-protein coupled receptor signaling pathway	IEP	Neighborhood
BP	GO:0007267	cell-cell signaling	IEP	Neighborhood
MF	GO:0008092	cytoskeletal protein binding	IEP	Neighborhood
MF	GO:0008526	phosphatidylinositol transporter activity	IEP	Neighborhood
BP	GO:0009664	plant-type cell wall organization	IEP	Neighborhood
BP	GO:0009827	plant-type cell wall modification	IEP	Neighborhood
MF	GO:0015297	antiporter activity	IEP	Neighborhood
MF	GO:0015298	solute:cation antiporter activity	IEP	Neighborhood
MF	GO:0015299	solute:proton antiporter activity	IEP	Neighborhood
MF	GO:0015491	cation:cation antiporter activity	IEP	Neighborhood
CC	GO:0015629	actin cytoskeleton	IEP	Neighborhood
BP	GO:0015672	monovalent inorganic cation transport	IEP	Neighborhood
BP	GO:0016192	vesicle-mediated transport	IEP	Neighborhood
CC	GO:0016324	apical plasma membrane	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0019001	guanyl nucleotide binding	IEP	Neighborhood
BP	GO:0022604	regulation of cell morphogenesis	IEP	Neighborhood
BP	GO:0023052	signaling	IEP	Neighborhood
BP	GO:0030029	actin filament-based process	IEP	Neighborhood
BP	GO:0030048	actin filament-based movement	IEP	Neighborhood
CC	GO:0030427	site of polarized growth	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
CC	GO:0031225	anchored component of membrane	IEP	Neighborhood
MF	GO:0032549	ribonucleoside binding	IEP	Neighborhood
MF	GO:0032550	purine ribonucleoside binding	IEP	Neighborhood
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Neighborhood
CC	GO:0035838	growing cell tip	IEP	Neighborhood
BP	GO:0042545	cell wall modification	IEP	Neighborhood
CC	GO:0042995	cell projection	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
CC	GO:0044463	cell projection part	IEP	Neighborhood
MF	GO:0044877	protein-containing complex binding	IEP	Neighborhood
BP	GO:0045229	external encapsulating structure organization	IEP	Neighborhood
MF	GO:0046910	pectinesterase inhibitor activity	IEP	Neighborhood
BP	GO:0048868	pollen tube development	IEP	Neighborhood
MF	GO:0051015	actin filament binding	IEP	Neighborhood
BP	GO:0051017	actin filament bundle assembly	IEP	Neighborhood
CC	GO:0051286	cell tip	IEP	Neighborhood
BP	GO:0051510	regulation of unidimensional cell growth	IEP	Neighborhood
BP	GO:0061572	actin filament bundle organization	IEP	Neighborhood
BP	GO:0071554	cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0071555	cell wall organization	IEP	Neighborhood
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0080092	regulation of pollen tube growth	IEP	Neighborhood
CC	GO:0090404	pollen tube tip	IEP	Neighborhood
CC	GO:0090406	pollen tube	IEP	Neighborhood
MF	GO:0099516	ion antiporter activity	IEP	Neighborhood
CC	GO:0120025	plasma membrane bounded cell projection	IEP	Neighborhood
CC	GO:0120038	plasma membrane bounded cell projection part	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001372	Dynein_light_chain_typ-1/2	5	59
IPR005512	PRONE_dom	169	514

External Links

No external refs found!

AT1G52240 (ATROPGEF11, ROPGEF11, PIRF1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation