AMTR_s00065p00106090 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00065.59

Description : RNA biosynthesis.transcriptional activation.bZIP superfamily.bZIP transcription factor

Gene families : OG0000508 (Archaeplastida) Phylogenetic Tree(s): OG0000508_tree ,
OG_05_0000312 (LandPlants) Phylogenetic Tree(s): OG_05_0000312_tree ,
OG_06_0012129 (SeedPlants) Phylogenetic Tree(s): OG_06_0012129_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00065p00106090
Cluster	HCCA: Cluster_7

Target	Alias	Description	ECC score	Gene Family Method
AT1G68880	AtbZIP, bZIP	basic leucine-zipper 8	0.04	Archaeplastida
AT3G62420	BZIP53, ATBZIP53	basic region/leucine zipper motif 53	0.04	Archaeplastida
AT5G15830	AtbZIP3, bZIP3	basic leucine-zipper 3	0.05	Archaeplastida
AT5G38800	bZIP43, AtbZIP43	basic leucine-zipper 43	0.04	Archaeplastida
AT5G49450	bZIP1, AtbZIP1	basic leucine-zipper 1	0.04	Archaeplastida
GSVIVT01010152001	No alias	RNA biosynthesis.transcriptional activation.bZIP...	0.04	Archaeplastida
GSVIVT01031238001	No alias	RNA biosynthesis.transcriptional activation.bZIP...	0.03	Archaeplastida
GSVIVT01036509001	No alias	No description available	0.03	Archaeplastida
Gb_20332	No alias	transcription factor (bZIP)	0.04	Archaeplastida
Gb_20759	No alias	transcription factor (bZIP)	0.03	Archaeplastida
Gb_29784	No alias	transcription factor (bZIP)	0.04	Archaeplastida
LOC_Os02g03960.1	No alias	transcription factor (bZIP)	0.03	Archaeplastida
LOC_Os02g09830.1	No alias	transcription factor (bZIP)	0.02	Archaeplastida
LOC_Os03g47200.1	No alias	transcription factor (bZIP)	0.03	Archaeplastida
LOC_Os08g26880.1	No alias	transcription factor (bZIP)	0.03	Archaeplastida
LOC_Os12g37410.1	No alias	transcription factor (bZIP)	0.04	Archaeplastida
LOC_Os12g37415.1	No alias	transcription factor (bZIP)	0.04	Archaeplastida
MA_35014g0010	No alias	transcription factor (bZIP)	0.07	Archaeplastida
MA_91576g0010	No alias	transcription factor (bZIP)	0.04	Archaeplastida
Pp3c13_15010V3.1	No alias	basic leucine-zipper 44	0.03	Archaeplastida
Solyc01g079480.3.1	No alias	transcription factor (bZIP)	0.08	Archaeplastida
Solyc01g109880.3.1	No alias	transcription factor (bZIP)	0.03	Archaeplastida
Solyc02g084860.1.1	No alias	transcription factor (bZIP)	0.03	Archaeplastida
Solyc03g043895.1.1	No alias	transcription factor (bZIP)	0.03	Archaeplastida
Solyc03g046440.3.1	No alias	transcription factor (bZIP)	0.03	Archaeplastida
Solyc04g005170.1.1	No alias	transcription factor (bZIP)	0.03	Archaeplastida
Solyc04g080740.1.1	No alias	transcription factor (bZIP)	0.02	Archaeplastida
Solyc06g009640.2.1	No alias	transcription factor (bZIP)	0.03	Archaeplastida
Zm00001e002843_P001	No alias	transcription factor (bZIP)	0.05	Archaeplastida
Zm00001e018211_P001	No alias	transcription factor (bZIP)	0.03	Archaeplastida
Zm00001e024325_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	Neighborhood
MF	GO:0004144	diacylglycerol O-acyltransferase activity	IEP	Neighborhood
MF	GO:0004616	phosphogluconate dehydrogenase (decarboxylating) activity	IEP	Neighborhood
MF	GO:0005215	transporter activity	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Neighborhood
BP	GO:0006098	pentose-phosphate shunt	IEP	Neighborhood
BP	GO:0006732	coenzyme metabolic process	IEP	Neighborhood
BP	GO:0006739	NADP metabolic process	IEP	Neighborhood
BP	GO:0006766	vitamin metabolic process	IEP	Neighborhood
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	Neighborhood
BP	GO:0006810	transport	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
MF	GO:0008374	O-acyltransferase activity	IEP	Neighborhood
MF	GO:0009055	electron transfer activity	IEP	Neighborhood
BP	GO:0009110	vitamin biosynthetic process	IEP	Neighborhood
MF	GO:0016160	amylase activity	IEP	Neighborhood
MF	GO:0016161	beta-amylase activity	IEP	Neighborhood
MF	GO:0016411	acylglycerol O-acyltransferase activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Neighborhood
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	Neighborhood
BP	GO:0042816	vitamin B6 metabolic process	IEP	Neighborhood
BP	GO:0042819	vitamin B6 biosynthetic process	IEP	Neighborhood
BP	GO:0042822	pyridoxal phosphate metabolic process	IEP	Neighborhood
BP	GO:0042823	pyridoxal phosphate biosynthetic process	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
BP	GO:0045017	glycerolipid biosynthetic process	IEP	Neighborhood
BP	GO:0046184	aldehyde biosynthetic process	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
BP	GO:0051156	glucose 6-phosphate metabolic process	IEP	Neighborhood
BP	GO:0051186	cofactor metabolic process	IEP	Neighborhood
BP	GO:0051234	establishment of localization	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	Neighborhood
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	Neighborhood
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004827	bZIP	40	87

External Links

No external refs found!

AMTR_s00065p00106090 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation