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  5. AT1G54130

AT1G54130 (RSH3, AT-RSH3, ATRSH3)


Aliases : RSH3, AT-RSH3, ATRSH3

Description : RELA/SPOT homolog 3


Gene families : OG0002354 (Archaeplastida) Phylogenetic Tree(s): OG0002354_tree ,
OG_05_0002470 (LandPlants) Phylogenetic Tree(s): OG_05_0002470_tree ,
OG_06_0004445 (SeedPlants) Phylogenetic Tree(s): OG_06_0004445_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G54130
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00240620 evm_27.TU.AmTr_v1... Probable GTP diphosphokinase RSH2, chloroplastic... 0.05 Archaeplastida
MA_140260g0010 No alias Probable GTP diphosphokinase RSH3, chloroplastic... 0.03 Archaeplastida
MA_1897g0010 No alias Probable GTP diphosphokinase RSH3, chloroplastic... 0.05 Archaeplastida
Pp3c5_12900V3.1 No alias RELA/SPOT homolog 2 0.03 Archaeplastida
Pp3c6_17010V3.1 No alias RELA/SPOT homolog 2 0.02 Archaeplastida
Solyc03g123370.3.1 No alias Probable GTP diphosphokinase RSH3, chloroplastic... 0.05 Archaeplastida
Zm00001e034279_P001 No alias Probable GTP diphosphokinase RSH3, chloroplastic... 0.04 Archaeplastida
Zm00001e035536_P002 No alias Probable GTP diphosphokinase RSH2, chloroplastic... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008728 GTP diphosphokinase activity IGI Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
CC GO:0000228 nuclear chromosome IEP Neighborhood
BP GO:0000302 response to reactive oxygen species IEP Neighborhood
BP GO:0000303 response to superoxide IEP Neighborhood
BP GO:0000305 response to oxygen radical IEP Neighborhood
CC GO:0000793 condensed chromosome IEP Neighborhood
CC GO:0000794 condensed nuclear chromosome IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
BP GO:0002682 regulation of immune system process IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0004096 catalase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005253 anion channel activity IEP Neighborhood
MF GO:0005342 organic acid transmembrane transporter activity IEP Neighborhood
CC GO:0005775 vacuolar lumen IEP Neighborhood
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Neighborhood
CC GO:0005795 Golgi stack IEP Neighborhood
BP GO:0006497 protein lipidation IEP Neighborhood
BP GO:0006498 N-terminal protein lipidation IEP Neighborhood
BP GO:0006499 N-terminal protein myristoylation IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006617 SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition IEP Neighborhood
BP GO:0006625 protein targeting to peroxisome IEP Neighborhood
BP GO:0006635 fatty acid beta-oxidation IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006664 glycolipid metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006865 amino acid transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006972 hyperosmotic response IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0006995 cellular response to nitrogen starvation IEP Neighborhood
BP GO:0007031 peroxisome organization IEP Neighborhood
BP GO:0007154 cell communication IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0007568 aging IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
MF GO:0008308 voltage-gated anion channel activity IEP Neighborhood
MF GO:0008312 7S RNA binding IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0008514 organic anion transmembrane transporter activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009247 glycolipid biosynthetic process IEP Neighborhood
BP GO:0009267 cellular response to starvation IEP Neighborhood
BP GO:0009270 response to humidity IEP Neighborhood
BP GO:0009414 response to water deprivation IEP Neighborhood
BP GO:0009415 response to water IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009611 response to wounding IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009723 response to ethylene IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0009737 response to abscisic acid IEP Neighborhood
BP GO:0009738 abscisic acid-activated signaling pathway IEP Neighborhood
BP GO:0009753 response to jasmonic acid IEP Neighborhood
BP GO:0009755 hormone-mediated signaling pathway IEP Neighborhood
BP GO:0009850 auxin metabolic process IEP Neighborhood
BP GO:0009863 salicylic acid mediated signaling pathway IEP Neighborhood
BP GO:0009867 jasmonic acid mediated signaling pathway IEP Neighborhood
BP GO:0009873 ethylene-activated signaling pathway IEP Neighborhood
BP GO:0009970 cellular response to sulfate starvation IEP Neighborhood
BP GO:0009991 response to extracellular stimulus IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010037 response to carbon dioxide IEP Neighborhood
BP GO:0010119 regulation of stomatal movement IEP Neighborhood
BP GO:0010200 response to chitin IEP Neighborhood
BP GO:0010260 animal organ senescence IEP Neighborhood
BP GO:0010265 SCF complex assembly IEP Neighborhood
BP GO:0010363 regulation of plant-type hypersensitive response IEP Neighborhood
BP GO:0010583 response to cyclopentenone IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
BP GO:0010941 regulation of cell death IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015171 amino acid transmembrane transporter activity IEP Neighborhood
MF GO:0015172 acidic amino acid transmembrane transporter activity IEP Neighborhood
MF GO:0015175 neutral amino acid transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015802 basic amino acid transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
BP GO:0015919 peroxisomal membrane transport IEP Neighborhood
BP GO:0016036 cellular response to phosphate starvation IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016420 malonyltransferase activity IEP Neighborhood
BP GO:0016558 protein import into peroxisome matrix IEP Neighborhood
BP GO:0016999 antibiotic metabolic process IEP Neighborhood
BP GO:0017001 antibiotic catabolic process IEP Neighborhood
BP GO:0018377 protein myristoylation IEP Neighborhood
BP GO:0019374 galactolipid metabolic process IEP Neighborhood
BP GO:0019375 galactolipid biosynthetic process IEP Neighborhood
BP GO:0019395 fatty acid oxidation IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0019900 kinase binding IEP Neighborhood
MF GO:0019901 protein kinase binding IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0030104 water homeostasis IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
BP GO:0030968 endoplasmic reticulum unfolded protein response IEP Neighborhood
BP GO:0031347 regulation of defense response IEP Neighborhood
BP GO:0031365 N-terminal protein amino acid modification IEP Neighborhood
BP GO:0031667 response to nutrient levels IEP Neighborhood
BP GO:0031668 cellular response to extracellular stimulus IEP Neighborhood
BP GO:0031669 cellular response to nutrient levels IEP Neighborhood
BP GO:0032104 regulation of response to extracellular stimulus IEP Neighborhood
BP GO:0032107 regulation of response to nutrient levels IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0033993 response to lipid IEP Neighborhood
MF GO:0034256 chlorophyll(ide) b reductase activity IEP Neighborhood
BP GO:0034440 lipid oxidation IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042430 indole-containing compound metabolic process IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
BP GO:0042446 hormone biosynthetic process IEP Neighborhood
BP GO:0042493 response to drug IEP Neighborhood
BP GO:0042538 hyperosmotic salinity response IEP Neighborhood
BP GO:0042594 response to starvation IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
BP GO:0042631 cellular response to water deprivation IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0042743 hydrogen peroxide metabolic process IEP Neighborhood
BP GO:0042744 hydrogen peroxide catabolic process IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0042891 antibiotic transport IEP Neighborhood
BP GO:0043067 regulation of programmed cell death IEP Neighborhood
BP GO:0043069 negative regulation of programmed cell death IEP Neighborhood
BP GO:0043090 amino acid import IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
BP GO:0043562 cellular response to nitrogen levels IEP Neighborhood
BP GO:0043574 peroxisomal transport IEP Neighborhood
BP GO:0043620 regulation of DNA-templated transcription in response to stress IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Neighborhood
BP GO:0045088 regulation of innate immune response IEP Neighborhood
BP GO:0045116 protein neddylation IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
BP GO:0046467 membrane lipid biosynthetic process IEP Neighborhood
BP GO:0046677 response to antibiotic IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0048480 stigma development IEP Neighborhood
CC GO:0048500 signal recognition particle IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0048871 multicellular organismal homeostasis IEP Neighborhood
MF GO:0050736 O-malonyltransferase activity IEP Neighborhood
BP GO:0050776 regulation of immune response IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050878 regulation of body fluid levels IEP Neighborhood
BP GO:0050891 multicellular organismal water homeostasis IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051187 cofactor catabolic process IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
MF GO:0052638 indole-3-butyrate beta-glucosyltransferase activity IEP Neighborhood
MF GO:0052694 jasmonoyl-isoleucine-12-hydroxylase activity IEP Neighborhood
BP GO:0060548 negative regulation of cell death IEP Neighborhood
BP GO:0065002 intracellular protein transmembrane transport IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0070301 cellular response to hydrogen peroxide IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0070887 cellular response to chemical stimulus IEP Neighborhood
BP GO:0071214 cellular response to abiotic stimulus IEP Neighborhood
BP GO:0071215 cellular response to abscisic acid stimulus IEP Neighborhood
BP GO:0071229 cellular response to acid chemical IEP Neighborhood
BP GO:0071236 cellular response to antibiotic IEP Neighborhood
BP GO:0071396 cellular response to lipid IEP Neighborhood
BP GO:0071462 cellular response to water stimulus IEP Neighborhood
BP GO:0071470 cellular response to osmotic stress IEP Neighborhood
BP GO:0071472 cellular response to salt stress IEP Neighborhood
BP GO:0071474 cellular hyperosmotic response IEP Neighborhood
BP GO:0071475 cellular hyperosmotic salinity response IEP Neighborhood
BP GO:0071496 cellular response to external stimulus IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0071806 protein transmembrane transport IEP Neighborhood
BP GO:0072347 response to anesthetic IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0072662 protein localization to peroxisome IEP Neighborhood
BP GO:0072663 establishment of protein localization to peroxisome IEP Neighborhood
BP GO:0080024 indolebutyric acid metabolic process IEP Neighborhood
BP GO:0080134 regulation of response to stress IEP Neighborhood
BP GO:0080135 regulation of cellular response to stress IEP Neighborhood
BP GO:0080167 response to karrikin IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
BP GO:0090332 stomatal closure IEP Neighborhood
BP GO:0097237 cellular response to toxic substance IEP Neighborhood
BP GO:0097305 response to alcohol IEP Neighborhood
BP GO:0097306 cellular response to alcohol IEP Neighborhood
BP GO:0104004 cellular response to environmental stimulus IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
BP GO:1901701 cellular response to oxygen-containing compound IEP Neighborhood
BP GO:1902456 regulation of stomatal opening IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
BP GO:1903509 liposaccharide metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003607 HD/PDEase_dom 221 372
IPR007685 RelA_SpoT 431 540
No external refs found!