1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00106p00141160

AMTR_s00106p00141160 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00106.113

Description : Protein degradation.peptidase families.metallopeptidase activities.Matrixin-type metalloprotease


Gene families : OG0001252 (Archaeplastida) Phylogenetic Tree(s): OG0001252_tree ,
OG_05_0000861 (LandPlants) Phylogenetic Tree(s): OG_05_0000861_tree ,
OG_06_0001192 (SeedPlants) Phylogenetic Tree(s): OG_06_0001192_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00106p00141160
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AT1G24140 No alias Matrixin family protein 0.02 Archaeplastida
AT1G70170 MMP matrix metalloproteinase 0.04 Archaeplastida
AT4G16640 No alias Matrixin family protein 0.02 Archaeplastida
GSVIVT01020151001 No alias Protein degradation.peptidase families.metallopeptidase... 0.05 Archaeplastida
LOC_Os06g13180.1 No alias Matrixin-type metalloprotease 0.05 Archaeplastida
MA_10426152g0010 No alias Matrixin-type metalloprotease 0.04 Archaeplastida
Pp3c8_14810V3.1 No alias Matrixin family protein 0.02 Archaeplastida
Smo110370 No alias Protein degradation.peptidase families.metallopeptidase... 0.02 Archaeplastida
Solyc04g005040.1.1 No alias Matrixin-type metalloprotease 0.04 Archaeplastida
Solyc04g005050.1.1 No alias Matrixin-type metalloprotease 0.04 Archaeplastida
Zm00001e036059_P001 No alias Matrixin-type metalloprotease 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0031012 extracellular matrix IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004556 alpha-amylase activity IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002477 Peptidoglycan-bd-like 62 119
IPR001818 Pept_M10_metallopeptidase 150 312
No external refs found!