AMTR_s00117p00072000 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00117.19

Description : Lipid metabolism.fatty acid synthesis.fatty acid chain termination.oleoyl-ACP thioesterase

Gene families : OG0000593 (Archaeplastida) Phylogenetic Tree(s): OG0000593_tree ,
OG_05_0004052 (LandPlants) Phylogenetic Tree(s): OG_05_0004052_tree ,
OG_06_0006679 (SeedPlants) Phylogenetic Tree(s): OG_06_0006679_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00117p00072000
Cluster	HCCA: Cluster_56

Target	Alias	Description	ECC score	Gene Family Method
AT1G08510	FATB	fatty acyl-ACP thioesterases B	0.02	Archaeplastida
AT3G25110	FaTA, AtFaTA	fatA acyl-ACP thioesterase	0.04	Archaeplastida
AT4G13050	No alias	Acyl-ACP thioesterase	0.04	Archaeplastida
GSVIVT01004951001	No alias	Lipid metabolism.fatty acid synthesis.fatty acid chain...	0.07	Archaeplastida
Gb_22110	No alias	palmitoyl-ACP thioesterase	0.02	Archaeplastida
LOC_Os09g32760.1	No alias	oleoyl-ACP thioesterase	0.07	Archaeplastida
MA_338g0010	No alias	Oleoyl-acyl carrier protein thioesterase 1,...	0.02	Archaeplastida
MA_5027g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
Pp3c25_14890V3.1	No alias	Acyl-ACP thioesterase	0.02	Archaeplastida
Solyc06g083380.3.1	No alias	oleoyl-ACP thioesterase	0.07	Archaeplastida
Zm00001e010117_P001	No alias	oleoyl-ACP thioesterase	0.04	Archaeplastida
Zm00001e036534_P002	No alias	palmitoyl-ACP thioesterase	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016790	thiolester hydrolase activity	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003864	3-methyl-2-oxobutanoate hydroxymethyltransferase activity	IEP	Neighborhood
MF	GO:0003913	DNA photolyase activity	IEP	Neighborhood
MF	GO:0003989	acetyl-CoA carboxylase activity	IEP	Neighborhood
MF	GO:0004488	methylenetetrahydrofolate dehydrogenase (NADP+) activity	IEP	Neighborhood
MF	GO:0004743	pyruvate kinase activity	IEP	Neighborhood
MF	GO:0004852	uroporphyrinogen-III synthase activity	IEP	Neighborhood
BP	GO:0005975	carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	Neighborhood
BP	GO:0006720	isoprenoid metabolic process	IEP	Neighborhood
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Neighborhood
BP	GO:0006732	coenzyme metabolic process	IEP	Neighborhood
BP	GO:0006760	folic acid-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006766	vitamin metabolic process	IEP	Neighborhood
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	Neighborhood
BP	GO:0006771	riboflavin metabolic process	IEP	Neighborhood
BP	GO:0007346	regulation of mitotic cell cycle	IEP	Neighborhood
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Neighborhood
MF	GO:0008483	transaminase activity	IEP	Neighborhood
BP	GO:0009108	coenzyme biosynthetic process	IEP	Neighborhood
BP	GO:0009110	vitamin biosynthetic process	IEP	Neighborhood
BP	GO:0009231	riboflavin biosynthetic process	IEP	Neighborhood
CC	GO:0009317	acetyl-CoA carboxylase complex	IEP	Neighborhood
CC	GO:0009349	riboflavin synthase complex	IEP	Neighborhood
BP	GO:0009396	folic acid-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0010564	regulation of cell cycle process	IEP	Neighborhood
BP	GO:0015939	pantothenate metabolic process	IEP	Neighborhood
BP	GO:0015940	pantothenate biosynthetic process	IEP	Neighborhood
MF	GO:0016421	CoA carboxylase activity	IEP	Neighborhood
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Neighborhood
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	Neighborhood
MF	GO:0016829	lyase activity	IEP	Neighborhood
MF	GO:0016830	carbon-carbon lyase activity	IEP	Neighborhood
MF	GO:0016836	hydro-lyase activity	IEP	Neighborhood
MF	GO:0016853	isomerase activity	IEP	Neighborhood
MF	GO:0016854	racemase and epimerase activity	IEP	Neighborhood
MF	GO:0016855	racemase and epimerase activity, acting on amino acids and derivatives	IEP	Neighborhood
MF	GO:0016866	intramolecular transferase activity	IEP	Neighborhood
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	Neighborhood
MF	GO:0016874	ligase activity	IEP	Neighborhood
MF	GO:0016885	ligase activity, forming carbon-carbon bonds	IEP	Neighborhood
BP	GO:0017144	drug metabolic process	IEP	Neighborhood
BP	GO:0018130	heterocycle biosynthetic process	IEP	Neighborhood
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Neighborhood
MF	GO:0019842	vitamin binding	IEP	Neighborhood
MF	GO:0030170	pyridoxal phosphate binding	IEP	Neighborhood
MF	GO:0030955	potassium ion binding	IEP	Neighborhood
MF	GO:0031420	alkali metal ion binding	IEP	Neighborhood
BP	GO:0032465	regulation of cytokinesis	IEP	Neighborhood
BP	GO:0032954	regulation of cytokinetic process	IEP	Neighborhood
BP	GO:0032955	regulation of division septum assembly	IEP	Neighborhood
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Neighborhood
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Neighborhood
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Neighborhood
MF	GO:0036361	racemase activity, acting on amino acids and derivatives	IEP	Neighborhood
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	Neighborhood
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	Neighborhood
BP	GO:0042559	pteridine-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0042726	flavin-containing compound metabolic process	IEP	Neighborhood
BP	GO:0042727	flavin-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0044087	regulation of cellular component biogenesis	IEP	Neighborhood
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Neighborhood
BP	GO:0046483	heterocycle metabolic process	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
MF	GO:0050662	coenzyme binding	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0050794	regulation of cellular process	IEP	Neighborhood
BP	GO:0051128	regulation of cellular component organization	IEP	Neighborhood
BP	GO:0051186	cofactor metabolic process	IEP	Neighborhood
BP	GO:0051188	cofactor biosynthetic process	IEP	Neighborhood
BP	GO:0051301	cell division	IEP	Neighborhood
BP	GO:0051302	regulation of cell division	IEP	Neighborhood
BP	GO:0051726	regulation of cell cycle	IEP	Neighborhood
MF	GO:0070279	vitamin B6 binding	IEP	Neighborhood
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Neighborhood
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Neighborhood
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Neighborhood
BP	GO:1901891	regulation of cell septum assembly	IEP	Neighborhood
BP	GO:1902412	regulation of mitotic cytokinesis	IEP	Neighborhood
CC	GO:1902494	catalytic complex	IEP	Neighborhood
BP	GO:1903436	regulation of mitotic cytokinetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002864	Acyl-ACP_thioesterase	81	370

External Links

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AMTR_s00117p00072000 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation