AMTR_s00129p00112550 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00129.86

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.ERF-type transcription factor

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000007 (SeedPlants) Phylogenetic Tree(s): OG_06_0000007_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00129p00112550
Cluster	HCCA: Cluster_56

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00133970	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00058p00066390	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.03	Archaeplastida
AMTR_s00069p00132820	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.04	Archaeplastida
AT1G06160	ORA59	octadecanoid-responsive Arabidopsis AP2/ERF 59	0.02	Archaeplastida
AT4G25490	DREB1B, ATCBF1, CBF1	C-repeat/DRE binding factor 1	0.03	Archaeplastida
AT5G07580	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT5G50080	ERF110	ethylene response factor 110	0.03	Archaeplastida
GSVIVT01015540001	No alias	Cell wall.cutin and suberin.biosynthesis...	0.02	Archaeplastida
GSVIVT01016684001	No alias	Ethylene-responsive transcription factor RAP2-12...	0.03	Archaeplastida
GSVIVT01017572001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01036201001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
Gb_02790	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_03368	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida
Gb_07475	No alias	no hits & (original description: none)	0.03	Archaeplastida
Gb_09495	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Gb_10809	No alias	transcription factor (ERF). transcription factor (ERN1)	0.05	Archaeplastida
Gb_12583	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_17211	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_19118	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_19320	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_23321	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_23870	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os02g43820.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os02g51670.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os03g64260.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os04g32620.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os04g46220.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os04g46410.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os05g49010.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os09g11480.2	No alias	Ethylene-responsive transcription factor ERF112...	0.04	Archaeplastida
LOC_Os11g13840.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os12g41060.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_10266433g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_10274g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_10427743g0020	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_10432141g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_18403g0020	No alias	Ethylene-responsive transcription factor RAP2-4...	0.02	Archaeplastida
MA_214063g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_4929994g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_5979847g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_83118g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
Pp3c1_27710V3.1	No alias	cytokinin response factor 2	0.02	Archaeplastida
Pp3c21_13130V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Smo104980	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
Solyc01g091760.3.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.05	Archaeplastida
Solyc02g067020.1.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Solyc02g077370.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc04g071770.3.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc08g078170.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc08g078180.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc09g089910.1.1	No alias	transcription factor (ERF). transcription factor (DREB)	0.03	Archaeplastida
Solyc09g089930.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc12g009490.3.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida
Zm00001e000608_P002	No alias	Ethylene-responsive transcription factor ERF073...	0.03	Archaeplastida
Zm00001e006692_P001	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e014415_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e017516_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e026192_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e035837_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e039555_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0003864	3-methyl-2-oxobutanoate hydroxymethyltransferase activity	IEP	Neighborhood
MF	GO:0003913	DNA photolyase activity	IEP	Neighborhood
BP	GO:0006082	organic acid metabolic process	IEP	Neighborhood
BP	GO:0006720	isoprenoid metabolic process	IEP	Neighborhood
BP	GO:0006766	vitamin metabolic process	IEP	Neighborhood
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	Neighborhood
BP	GO:0006950	response to stress	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Neighborhood
MF	GO:0008483	transaminase activity	IEP	Neighborhood
BP	GO:0008610	lipid biosynthetic process	IEP	Neighborhood
BP	GO:0009110	vitamin biosynthetic process	IEP	Neighborhood
BP	GO:0015939	pantothenate metabolic process	IEP	Neighborhood
BP	GO:0015940	pantothenate biosynthetic process	IEP	Neighborhood
BP	GO:0016053	organic acid biosynthetic process	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	Neighborhood
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	Neighborhood
MF	GO:0016790	thiolester hydrolase activity	IEP	Neighborhood
MF	GO:0016829	lyase activity	IEP	Neighborhood
MF	GO:0016830	carbon-carbon lyase activity	IEP	Neighborhood
MF	GO:0016854	racemase and epimerase activity	IEP	Neighborhood
MF	GO:0016855	racemase and epimerase activity, acting on amino acids and derivatives	IEP	Neighborhood
BP	GO:0019752	carboxylic acid metabolic process	IEP	Neighborhood
MF	GO:0019842	vitamin binding	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0030170	pyridoxal phosphate binding	IEP	Neighborhood
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Neighborhood
MF	GO:0036361	racemase activity, acting on amino acids and derivatives	IEP	Neighborhood
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	Neighborhood
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0043436	oxoacid metabolic process	IEP	Neighborhood
BP	GO:0044255	cellular lipid metabolic process	IEP	Neighborhood
BP	GO:0044281	small molecule metabolic process	IEP	Neighborhood
BP	GO:0044283	small molecule biosynthetic process	IEP	Neighborhood
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
MF	GO:0050662	coenzyme binding	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
MF	GO:0070279	vitamin B6 binding	IEP	Neighborhood
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	93	142

External Links

No external refs found!

AMTR_s00129p00112550 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation