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Aliases : evm_27.TU.AmTr_v1.0_scaffold04975.1
Description : RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.TFC4/Tau131 component
Gene families : OG0003851 (Archaeplastida) Phylogenetic Tree(s): OG0003851_tree ,
OG_05_0004131 (LandPlants) Phylogenetic Tree(s): OG_05_0004131_tree ,
OG_06_0004998 (SeedPlants) Phylogenetic Tree(s): OG_06_0004998_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s04975p00003190 | |
| Cluster | HCCA: Cluster_249 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Solyc06g063420.4.1 | No alias | component TFC4/Tau131 of TFIIIc transcription factor complex | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000152 | nuclear ubiquitin ligase complex | IEP | Neighborhood |
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Neighborhood |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Neighborhood |
| MF | GO:0004143 | diacylglycerol kinase activity | IEP | Neighborhood |
| MF | GO:0004176 | ATP-dependent peptidase activity | IEP | Neighborhood |
| MF | GO:0005215 | transporter activity | IEP | Neighborhood |
| MF | GO:0005319 | lipid transporter activity | IEP | Neighborhood |
| MF | GO:0005342 | organic acid transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0005343 | organic acid:sodium symporter activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| CC | GO:0005680 | anaphase-promoting complex | IEP | Neighborhood |
| CC | GO:0005694 | chromosome | IEP | Neighborhood |
| CC | GO:0005789 | endoplasmic reticulum membrane | IEP | Neighborhood |
| CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
| BP | GO:0006265 | DNA topological change | IEP | Neighborhood |
| BP | GO:0006281 | DNA repair | IEP | Neighborhood |
| BP | GO:0006284 | base-excision repair | IEP | Neighborhood |
| BP | GO:0006298 | mismatch repair | IEP | Neighborhood |
| BP | GO:0006497 | protein lipidation | IEP | Neighborhood |
| BP | GO:0006505 | GPI anchor metabolic process | IEP | Neighborhood |
| BP | GO:0006506 | GPI anchor biosynthetic process | IEP | Neighborhood |
| BP | GO:0006629 | lipid metabolic process | IEP | Neighborhood |
| BP | GO:0006643 | membrane lipid metabolic process | IEP | Neighborhood |
| BP | GO:0006644 | phospholipid metabolic process | IEP | Neighborhood |
| BP | GO:0006650 | glycerophospholipid metabolic process | IEP | Neighborhood |
| BP | GO:0006661 | phosphatidylinositol biosynthetic process | IEP | Neighborhood |
| BP | GO:0006664 | glycolipid metabolic process | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0006814 | sodium ion transport | IEP | Neighborhood |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Neighborhood |
| BP | GO:0007186 | G-protein coupled receptor signaling pathway | IEP | Neighborhood |
| BP | GO:0007205 | protein kinase C-activating G-protein coupled receptor signaling pathway | IEP | Neighborhood |
| MF | GO:0008028 | monocarboxylic acid transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0008134 | transcription factor binding | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| MF | GO:0008484 | sulfuric ester hydrolase activity | IEP | Neighborhood |
| MF | GO:0008508 | bile acid:sodium symporter activity | IEP | Neighborhood |
| MF | GO:0008514 | organic anion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0008565 | protein transporter activity | IEP | Neighborhood |
| BP | GO:0008610 | lipid biosynthetic process | IEP | Neighborhood |
| BP | GO:0008654 | phospholipid biosynthetic process | IEP | Neighborhood |
| MF | GO:0008915 | lipid-A-disaccharide synthase activity | IEP | Neighborhood |
| BP | GO:0009245 | lipid A biosynthetic process | IEP | Neighborhood |
| BP | GO:0009247 | glycolipid biosynthetic process | IEP | Neighborhood |
| BP | GO:0009311 | oligosaccharide metabolic process | IEP | Neighborhood |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Neighborhood |
| BP | GO:0009891 | positive regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0009893 | positive regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0010628 | positive regulation of gene expression | IEP | Neighborhood |
| MF | GO:0015081 | sodium ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015125 | bile acid transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015293 | symporter activity | IEP | Neighborhood |
| MF | GO:0015294 | solute:cation symporter activity | IEP | Neighborhood |
| MF | GO:0015355 | secondary active monocarboxylate transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015370 | solute:sodium symporter activity | IEP | Neighborhood |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015405 | P-P-bond-hydrolysis-driven transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0016301 | kinase activity | IEP | Neighborhood |
| MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | Neighborhood |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Neighborhood |
| MF | GO:0016740 | transferase activity | IEP | Neighborhood |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Neighborhood |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Neighborhood |
| MF | GO:0016887 | ATPase activity | IEP | Neighborhood |
| MF | GO:0017025 | TBP-class protein binding | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Neighborhood |
| BP | GO:0019637 | organophosphate metabolic process | IEP | Neighborhood |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | Neighborhood |
| CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| BP | GO:0033554 | cellular response to stress | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| MF | GO:0042623 | ATPase activity, coupled | IEP | Neighborhood |
| MF | GO:0042626 | ATPase activity, coupled to transmembrane movement of substances | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| MF | GO:0043492 | ATPase activity, coupled to movement of substances | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| CC | GO:0044422 | organelle part | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044428 | nuclear part | IEP | Neighborhood |
| CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| BP | GO:0045017 | glycerolipid biosynthetic process | IEP | Neighborhood |
| BP | GO:0045893 | positive regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0046467 | membrane lipid biosynthetic process | IEP | Neighborhood |
| BP | GO:0046474 | glycerophospholipid biosynthetic process | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| BP | GO:0046486 | glycerolipid metabolic process | IEP | Neighborhood |
| BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | Neighborhood |
| BP | GO:0046493 | lipid A metabolic process | IEP | Neighborhood |
| MF | GO:0046943 | carboxylic acid transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0048518 | positive regulation of biological process | IEP | Neighborhood |
| BP | GO:0048522 | positive regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051254 | positive regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0051276 | chromosome organization | IEP | Neighborhood |
| BP | GO:0051716 | cellular response to stimulus | IEP | Neighborhood |
| BP | GO:0071103 | DNA conformation change | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Neighborhood |
| MF | GO:0140161 | monocarboxylate:sodium symporter activity | IEP | Neighborhood |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | Neighborhood |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| BP | GO:1901269 | lipooligosaccharide metabolic process | IEP | Neighborhood |
| BP | GO:1901271 | lipooligosaccharide biosynthetic process | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| MF | GO:1901618 | organic hydroxy compound transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:1902680 | positive regulation of RNA biosynthetic process | IEP | Neighborhood |
| BP | GO:1903508 | positive regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:1903509 | liposaccharide metabolic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |