AT1G06190

Description : Rho termination factor

Gene families : OG0004476 (Archaeplastida) Phylogenetic Tree(s): OG0004476_tree ,
OG_05_0003078 (LandPlants) Phylogenetic Tree(s): OG_05_0003078_tree ,
OG_06_0008243 (SeedPlants) Phylogenetic Tree(s): OG_06_0008243_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G06190
Cluster	HCCA: Cluster_149

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00067p00046000	evm_27.TU.AmTr_v1...	Rho-N domain-containing protein 1, chloroplastic...	0.03	Archaeplastida
Gb_35766	No alias	no hits & (original description: none)	0.06	Archaeplastida
Gb_41693	No alias	no hits & (original description: none)	0.11	Archaeplastida
LOC_Os03g08480.1	No alias	SAP-like protein BP-73 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
MA_9945g0010	No alias	no hits & (original description: none)	0.05	Archaeplastida
Pp3c23_18800V3.1	No alias	Rho termination factor	0.07	Archaeplastida
Smo445504	No alias	No description available	0.03	Archaeplastida
Solyc09g025260.4.1	No alias	Rho-N domain-containing protein 1, chloroplastic...	0.13	Archaeplastida
Zm00001e016176_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006351	transcription, DNA-templated	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	None	Extended
BP	GO:0006364	rRNA processing	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006397	mRNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	IMP	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	IDA	Interproscan
BP	GO:0009790	embryo development	None	Extended
BP	GO:0009793	embryo development ending in seed dormancy	RCA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010239	chloroplast mRNA processing	IMP	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0010628	positive regulation of gene expression	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
BP	GO:0016072	rRNA metabolic process	None	Extended
BP	GO:0016226	iron-sulfur cluster assembly	RCA	Interproscan
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
MF	GO:0019843	rRNA binding	IDA	Interproscan
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0031163	metallo-sulfur cluster assembly	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0031425	chloroplast RNA processing	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042793	plastid transcription	RCA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043621	protein self-association	IPI	Interproscan
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045893	positive regulation of transcription, DNA-templated	RCA	Interproscan
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051186	cofactor metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
BP	GO:0097659	nucleic acid-templated transcription	None	Extended
BP	GO:1901259	chloroplast rRNA processing	IMP	Interproscan
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	IEP	Neighborhood
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	Neighborhood
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
MF	GO:0000175	3'-5'-exoribonuclease activity	IEP	Neighborhood
CC	GO:0000229	cytoplasmic chromosome	IEP	Neighborhood
BP	GO:0000304	response to singlet oxygen	IEP	Neighborhood
BP	GO:0000373	Group II intron splicing	IEP	Neighborhood
BP	GO:0001505	regulation of neurotransmitter levels	IEP	Neighborhood
MF	GO:0001882	nucleoside binding	IEP	Neighborhood
MF	GO:0001883	purine nucleoside binding	IEP	Neighborhood
BP	GO:0002252	immune effector process	IEP	Neighborhood
BP	GO:0002376	immune system process	IEP	Neighborhood
MF	GO:0003735	structural constituent of ribosome	IEP	Neighborhood
MF	GO:0003746	translation elongation factor activity	IEP	Neighborhood
MF	GO:0003924	GTPase activity	IEP	Neighborhood
MF	GO:0004124	cysteine synthase activity	IEP	Neighborhood
MF	GO:0004386	helicase activity	IEP	Neighborhood
MF	GO:0004418	hydroxymethylbilane synthase activity	IEP	Neighborhood
MF	GO:0004518	nuclease activity	IEP	Neighborhood
MF	GO:0004519	endonuclease activity	IEP	Neighborhood
MF	GO:0004521	endoribonuclease activity	IEP	Neighborhood
MF	GO:0004525	ribonuclease III activity	IEP	Neighborhood
MF	GO:0004526	ribonuclease P activity	IEP	Neighborhood
MF	GO:0004532	exoribonuclease activity	IEP	Neighborhood
MF	GO:0004540	ribonuclease activity	IEP	Neighborhood
MF	GO:0004549	tRNA-specific ribonuclease activity	IEP	Neighborhood
MF	GO:0004654	polyribonucleotide nucleotidyltransferase activity	IEP	Neighborhood
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Neighborhood
MF	GO:0004817	cysteine-tRNA ligase activity	IEP	Neighborhood
MF	GO:0005198	structural molecule activity	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
MF	GO:0005525	GTP binding	IEP	Neighborhood
CC	GO:0005694	chromosome	IEP	Neighborhood
CC	GO:0005840	ribosome	IEP	Neighborhood
BP	GO:0005982	starch metabolic process	IEP	Neighborhood
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Neighborhood
BP	GO:0006082	organic acid metabolic process	IEP	Neighborhood
BP	GO:0006089	lactate metabolic process	IEP	Neighborhood
BP	GO:0006090	pyruvate metabolic process	IEP	Neighborhood
BP	GO:0006091	generation of precursor metabolites and energy	IEP	Neighborhood
BP	GO:0006098	pentose-phosphate shunt	IEP	Neighborhood
BP	GO:0006109	regulation of carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0006399	tRNA metabolic process	IEP	Neighborhood
BP	GO:0006412	translation	IEP	Neighborhood
BP	GO:0006414	translational elongation	IEP	Neighborhood
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Neighborhood
BP	GO:0006423	cysteinyl-tRNA aminoacylation	IEP	Neighborhood
BP	GO:0006457	protein folding	IEP	Neighborhood
BP	GO:0006458	'de novo' protein folding	IEP	Neighborhood
BP	GO:0006518	peptide metabolic process	IEP	Neighborhood
BP	GO:0006520	cellular amino acid metabolic process	IEP	Neighborhood
BP	GO:0006534	cysteine metabolic process	IEP	Neighborhood
BP	GO:0006544	glycine metabolic process	IEP	Neighborhood
BP	GO:0006546	glycine catabolic process	IEP	Neighborhood
BP	GO:0006605	protein targeting	IEP	Neighborhood
BP	GO:0006629	lipid metabolic process	IEP	Neighborhood
BP	GO:0006636	unsaturated fatty acid biosynthetic process	IEP	Neighborhood
BP	GO:0006644	phospholipid metabolic process	IEP	Neighborhood
BP	GO:0006650	glycerophospholipid metabolic process	IEP	Neighborhood
BP	GO:0006655	phosphatidylglycerol biosynthetic process	IEP	Neighborhood
BP	GO:0006720	isoprenoid metabolic process	IEP	Neighborhood
BP	GO:0006721	terpenoid metabolic process	IEP	Neighborhood
BP	GO:0006732	coenzyme metabolic process	IEP	Neighborhood
BP	GO:0006733	oxidoreduction coenzyme metabolic process	IEP	Neighborhood
BP	GO:0006739	NADP metabolic process	IEP	Neighborhood
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	Neighborhood
BP	GO:0006766	vitamin metabolic process	IEP	Neighborhood
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006809	nitric oxide biosynthetic process	IEP	Neighborhood
BP	GO:0006810	transport	IEP	Neighborhood
BP	GO:0006886	intracellular protein transport	IEP	Neighborhood
BP	GO:0006996	organelle organization	IEP	Neighborhood
BP	GO:0007006	mitochondrial membrane organization	IEP	Neighborhood
BP	GO:0007007	inner mitochondrial membrane organization	IEP	Neighborhood
MF	GO:0008026	ATP-dependent helicase activity	IEP	Neighborhood
BP	GO:0008033	tRNA processing	IEP	Neighborhood
BP	GO:0008104	protein localization	IEP	Neighborhood
MF	GO:0008135	translation factor activity, RNA binding	IEP	Neighborhood
MF	GO:0008235	metalloexopeptidase activity	IEP	Neighborhood
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Neighborhood
BP	GO:0008610	lipid biosynthetic process	IEP	Neighborhood
BP	GO:0008652	cellular amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0008654	phospholipid biosynthetic process	IEP	Neighborhood
MF	GO:0009041	uridylate kinase activity	IEP	Neighborhood
BP	GO:0009056	catabolic process	IEP	Neighborhood
BP	GO:0009069	serine family amino acid metabolic process	IEP	Neighborhood
BP	GO:0009070	serine family amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009071	serine family amino acid catabolic process	IEP	Neighborhood
BP	GO:0009072	aromatic amino acid family metabolic process	IEP	Neighborhood
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	Neighborhood
BP	GO:0009106	lipoate metabolic process	IEP	Neighborhood
BP	GO:0009108	coenzyme biosynthetic process	IEP	Neighborhood
BP	GO:0009117	nucleotide metabolic process	IEP	Neighborhood
BP	GO:0009240	isopentenyl diphosphate biosynthetic process	IEP	Neighborhood
CC	GO:0009295	nucleoid	IEP	Neighborhood
BP	GO:0009409	response to cold	IEP	Neighborhood
BP	GO:0009438	methylglyoxal metabolic process	IEP	Neighborhood
BP	GO:0009451	RNA modification	IEP	Neighborhood
CC	GO:0009508	plastid chromosome	IEP	Neighborhood
CC	GO:0009526	plastid envelope	IEP	Neighborhood
CC	GO:0009528	plastid inner membrane	IEP	Neighborhood
CC	GO:0009532	plastid stroma	IEP	Neighborhood
CC	GO:0009533	chloroplast stromal thylakoid	IEP	Neighborhood
CC	GO:0009534	chloroplast thylakoid	IEP	Neighborhood
CC	GO:0009535	chloroplast thylakoid membrane	IEP	Neighborhood
CC	GO:0009570	chloroplast stroma	IEP	Neighborhood
CC	GO:0009579	thylakoid	IEP	Neighborhood
BP	GO:0009615	response to virus	IEP	Neighborhood
BP	GO:0009643	photosynthetic acclimation	IEP	Neighborhood
BP	GO:0009653	anatomical structure morphogenesis	IEP	Neighborhood
BP	GO:0009657	plastid organization	IEP	Neighborhood
BP	GO:0009658	chloroplast organization	IEP	Neighborhood
BP	GO:0009663	plasmodesma organization	IEP	Neighborhood
BP	GO:0009668	plastid membrane organization	IEP	Neighborhood
CC	GO:0009706	chloroplast inner membrane	IEP	Neighborhood
BP	GO:0009902	chloroplast relocation	IEP	Neighborhood
CC	GO:0009941	chloroplast envelope	IEP	Neighborhood
BP	GO:0009965	leaf morphogenesis	IEP	Neighborhood
MF	GO:0009982	pseudouridine synthase activity	IEP	Neighborhood
BP	GO:0010027	thylakoid membrane organization	IEP	Neighborhood
BP	GO:0010103	stomatal complex morphogenesis	IEP	Neighborhood
BP	GO:0010206	photosystem II repair	IEP	Neighborhood
BP	GO:0010207	photosystem II assembly	IEP	Neighborhood
BP	GO:0010228	vegetative to reproductive phase transition of meristem	IEP	Neighborhood
BP	GO:0010267	production of ta-siRNAs involved in RNA interference	IEP	Neighborhood
CC	GO:0010319	stromule	IEP	Neighborhood
BP	GO:0010322	regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	IEP	Neighborhood
BP	GO:0010323	negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	IEP	Neighborhood
BP	GO:0010496	intercellular transport	IEP	Neighborhood
BP	GO:0010497	plasmodesmata-mediated intercellular transport	IEP	Neighborhood
BP	GO:0010565	regulation of cellular ketone metabolic process	IEP	Neighborhood
BP	GO:0010675	regulation of cellular carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0010677	negative regulation of cellular carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0015031	protein transport	IEP	Neighborhood
MF	GO:0015035	protein disulfide oxidoreductase activity	IEP	Neighborhood
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Neighborhood
BP	GO:0015833	peptide transport	IEP	Neighborhood
BP	GO:0015979	photosynthesis	IEP	Neighborhood
BP	GO:0015994	chlorophyll metabolic process	IEP	Neighborhood
BP	GO:0015995	chlorophyll biosynthetic process	IEP	Neighborhood
BP	GO:0016053	organic acid biosynthetic process	IEP	Neighborhood
BP	GO:0016108	tetraterpenoid metabolic process	IEP	Neighborhood
BP	GO:0016109	tetraterpenoid biosynthetic process	IEP	Neighborhood
BP	GO:0016114	terpenoid biosynthetic process	IEP	Neighborhood
BP	GO:0016116	carotenoid metabolic process	IEP	Neighborhood
BP	GO:0016117	carotenoid biosynthetic process	IEP	Neighborhood
BP	GO:0016119	carotene metabolic process	IEP	Neighborhood
BP	GO:0016120	carotene biosynthetic process	IEP	Neighborhood
BP	GO:0016122	xanthophyll metabolic process	IEP	Neighborhood
BP	GO:0016123	xanthophyll biosynthetic process	IEP	Neighborhood
MF	GO:0016462	pyrophosphatase activity	IEP	Neighborhood
BP	GO:0016556	mRNA modification	IEP	Neighborhood
MF	GO:0016668	oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor	IEP	Neighborhood
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Neighborhood
MF	GO:0016776	phosphotransferase activity, phosphate group as acceptor	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016796	exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Neighborhood
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Neighborhood
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Neighborhood
MF	GO:0016853	isomerase activity	IEP	Neighborhood
MF	GO:0016866	intramolecular transferase activity	IEP	Neighborhood
MF	GO:0016869	intramolecular transferase activity, transferring amino groups	IEP	Neighborhood
MF	GO:0016874	ligase activity	IEP	Neighborhood
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Neighborhood
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	Neighborhood
MF	GO:0016887	ATPase activity	IEP	Neighborhood
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	Neighborhood
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Neighborhood
MF	GO:0016896	exoribonuclease activity, producing 5'-phosphomonoesters	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Neighborhood
BP	GO:0017144	drug metabolic process	IEP	Neighborhood
MF	GO:0019001	guanyl nucleotide binding	IEP	Neighborhood
BP	GO:0019216	regulation of lipid metabolic process	IEP	Neighborhood
BP	GO:0019220	regulation of phosphate metabolic process	IEP	Neighborhood
BP	GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	IEP	Neighborhood
BP	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	IEP	Neighborhood
BP	GO:0019344	cysteine biosynthetic process	IEP	Neighborhood
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	Neighborhood
BP	GO:0019637	organophosphate metabolic process	IEP	Neighborhood
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	Neighborhood
BP	GO:0019693	ribose phosphate metabolic process	IEP	Neighborhood
BP	GO:0019747	regulation of isoprenoid metabolic process	IEP	Neighborhood
BP	GO:0019750	chloroplast localization	IEP	Neighborhood
BP	GO:0019752	carboxylic acid metabolic process	IEP	Neighborhood
CC	GO:0019866	organelle inner membrane	IEP	Neighborhood
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Neighborhood
BP	GO:0030091	protein repair	IEP	Neighborhood
BP	GO:0030154	cell differentiation	IEP	Neighborhood
BP	GO:0030422	production of siRNA involved in RNA interference	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
BP	GO:0031050	dsRNA fragmentation	IEP	Neighborhood
BP	GO:0031123	RNA 3'-end processing	IEP	Neighborhood
CC	GO:0031897	Tic complex	IEP	Neighborhood
CC	GO:0031967	organelle envelope	IEP	Neighborhood
CC	GO:0031969	chloroplast membrane	IEP	Neighborhood
CC	GO:0031975	envelope	IEP	Neighborhood
CC	GO:0031976	plastid thylakoid	IEP	Neighborhood
CC	GO:0031984	organelle subcompartment	IEP	Neighborhood
MF	GO:0032296	double-stranded RNA-specific ribonuclease activity	IEP	Neighborhood
MF	GO:0032549	ribonucleoside binding	IEP	Neighborhood
MF	GO:0032550	purine ribonucleoside binding	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Neighborhood
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Neighborhood
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Neighborhood
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Neighborhood
BP	GO:0033036	macromolecule localization	IEP	Neighborhood
BP	GO:0033365	protein localization to organelle	IEP	Neighborhood
BP	GO:0033559	unsaturated fatty acid metabolic process	IEP	Neighborhood
BP	GO:0034250	positive regulation of cellular amide metabolic process	IEP	Neighborhood
BP	GO:0034330	cell junction organization	IEP	Neighborhood
CC	GO:0034357	photosynthetic membrane	IEP	Neighborhood
BP	GO:0034613	cellular protein localization	IEP	Neighborhood
BP	GO:0035196	production of miRNAs involved in gene silencing by miRNA	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
BP	GO:0042133	neurotransmitter metabolic process	IEP	Neighborhood
BP	GO:0042135	neurotransmitter catabolic process	IEP	Neighborhood
BP	GO:0042136	neurotransmitter biosynthetic process	IEP	Neighborhood
CC	GO:0042170	plastid membrane	IEP	Neighborhood
BP	GO:0042180	cellular ketone metabolic process	IEP	Neighborhood
BP	GO:0042182	ketone catabolic process	IEP	Neighborhood
BP	GO:0042254	ribosome biogenesis	IEP	Neighborhood
MF	GO:0042286	glutamate-1-semialdehyde 2,1-aminomutase activity	IEP	Neighborhood
BP	GO:0042407	cristae formation	IEP	Neighborhood
BP	GO:0042440	pigment metabolic process	IEP	Neighborhood
CC	GO:0042644	chloroplast nucleoid	IEP	Neighborhood
CC	GO:0042646	plastid nucleoid	IEP	Neighborhood
CC	GO:0042651	thylakoid membrane	IEP	Neighborhood
BP	GO:0042737	drug catabolic process	IEP	Neighborhood
BP	GO:0042780	tRNA 3'-end processing	IEP	Neighborhood
MF	GO:0042781	3'-tRNA processing endoribonuclease activity	IEP	Neighborhood
BP	GO:0042886	amide transport	IEP	Neighborhood
BP	GO:0043038	amino acid activation	IEP	Neighborhood
BP	GO:0043039	tRNA aminoacylation	IEP	Neighborhood
BP	GO:0043043	peptide biosynthetic process	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
CC	GO:0043228	non-membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Neighborhood
BP	GO:0043436	oxoacid metabolic process	IEP	Neighborhood
BP	GO:0043603	cellular amide metabolic process	IEP	Neighborhood
BP	GO:0043604	amide biosynthetic process	IEP	Neighborhood
BP	GO:0043628	ncRNA 3'-end processing	IEP	Neighborhood
BP	GO:0044085	cellular component biogenesis	IEP	Neighborhood
BP	GO:0044255	cellular lipid metabolic process	IEP	Neighborhood
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Neighborhood
BP	GO:0044281	small molecule metabolic process	IEP	Neighborhood
BP	GO:0044283	small molecule biosynthetic process	IEP	Neighborhood
CC	GO:0044422	organelle part	IEP	Neighborhood
CC	GO:0044434	chloroplast part	IEP	Neighborhood
CC	GO:0044435	plastid part	IEP	Neighborhood
CC	GO:0044436	thylakoid part	IEP	Neighborhood
CC	GO:0044446	intracellular organelle part	IEP	Neighborhood
BP	GO:0045017	glycerolipid biosynthetic process	IEP	Neighborhood
BP	GO:0045036	protein targeting to chloroplast	IEP	Neighborhood
BP	GO:0045037	protein import into chloroplast stroma	IEP	Neighborhood
BP	GO:0045184	establishment of protein localization	IEP	Neighborhood
BP	GO:0045216	cell-cell junction organization	IEP	Neighborhood
BP	GO:0045454	cell redox homeostasis	IEP	Neighborhood
BP	GO:0045727	positive regulation of translation	IEP	Neighborhood
BP	GO:0045827	negative regulation of isoprenoid metabolic process	IEP	Neighborhood
BP	GO:0045833	negative regulation of lipid metabolic process	IEP	Neighborhood
BP	GO:0045912	negative regulation of carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0046148	pigment biosynthetic process	IEP	Neighborhood
BP	GO:0046185	aldehyde catabolic process	IEP	Neighborhood
BP	GO:0046209	nitric oxide metabolic process	IEP	Neighborhood
BP	GO:0046246	terpene biosynthetic process	IEP	Neighborhood
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Neighborhood
BP	GO:0046471	phosphatidylglycerol metabolic process	IEP	Neighborhood
BP	GO:0046474	glycerophospholipid biosynthetic process	IEP	Neighborhood
BP	GO:0046486	glycerolipid metabolic process	IEP	Neighborhood
BP	GO:0046490	isopentenyl diphosphate metabolic process	IEP	Neighborhood
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	Neighborhood
BP	GO:0046890	regulation of lipid biosynthetic process	IEP	Neighborhood
BP	GO:0046907	intracellular transport	IEP	Neighborhood
MF	GO:0047134	protein-disulfide reductase activity	IEP	Neighborhood
BP	GO:0048481	plant ovule development	IEP	Neighborhood
MF	GO:0050145	nucleoside monophosphate kinase activity	IEP	Neighborhood
MF	GO:0050567	glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	IEP	Neighborhood
BP	GO:0051055	negative regulation of lipid biosynthetic process	IEP	Neighborhood
BP	GO:0051084	'de novo' posttranslational protein folding	IEP	Neighborhood
BP	GO:0051085	chaperone cofactor-dependent protein refolding	IEP	Neighborhood
BP	GO:0051156	glucose 6-phosphate metabolic process	IEP	Neighborhood
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051188	cofactor biosynthetic process	IEP	Neighborhood
BP	GO:0051234	establishment of localization	IEP	Neighborhood
BP	GO:0051246	regulation of protein metabolic process	IEP	Neighborhood
BP	GO:0051341	regulation of oxidoreductase activity	IEP	Neighborhood
BP	GO:0051353	positive regulation of oxidoreductase activity	IEP	Neighborhood
BP	GO:0051596	methylglyoxal catabolic process	IEP	Neighborhood
BP	GO:0051607	defense response to virus	IEP	Neighborhood
BP	GO:0051640	organelle localization	IEP	Neighborhood
BP	GO:0051641	cellular localization	IEP	Neighborhood
BP	GO:0051644	plastid localization	IEP	Neighborhood
BP	GO:0051649	establishment of localization in cell	IEP	Neighborhood
BP	GO:0051656	establishment of organelle localization	IEP	Neighborhood
BP	GO:0051667	establishment of plastid localization	IEP	Neighborhood
CC	GO:0055035	plastid thylakoid membrane	IEP	Neighborhood
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	Neighborhood
BP	GO:0061024	membrane organization	IEP	Neighborhood
BP	GO:0061077	chaperone-mediated protein folding	IEP	Neighborhood
BP	GO:0061727	methylglyoxal catabolic process to lactate	IEP	Neighborhood
BP	GO:0062012	regulation of small molecule metabolic process	IEP	Neighborhood
BP	GO:0062014	negative regulation of small molecule metabolic process	IEP	Neighborhood
BP	GO:0065002	intracellular protein transmembrane transport	IEP	Neighborhood
MF	GO:0070035	purine NTP-dependent helicase activity	IEP	Neighborhood
BP	GO:0070727	cellular macromolecule localization	IEP	Neighborhood
BP	GO:0070918	production of small RNA involved in gene silencing by RNA	IEP	Neighborhood
BP	GO:0071071	regulation of phospholipid biosynthetic process	IEP	Neighborhood
BP	GO:0071072	negative regulation of phospholipid biosynthetic process	IEP	Neighborhood
BP	GO:0071702	organic substance transport	IEP	Neighborhood
BP	GO:0071705	nitrogen compound transport	IEP	Neighborhood
BP	GO:0071806	protein transmembrane transport	IEP	Neighborhood
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	Neighborhood
BP	GO:0072594	establishment of protein localization to organelle	IEP	Neighborhood
BP	GO:0072596	establishment of protein localization to chloroplast	IEP	Neighborhood
BP	GO:0072598	protein localization to chloroplast	IEP	Neighborhood
BP	GO:0090322	regulation of superoxide metabolic process	IEP	Neighborhood
BP	GO:0090407	organophosphate biosynthetic process	IEP	Neighborhood
BP	GO:0090626	plant epidermis morphogenesis	IEP	Neighborhood
BP	GO:0090698	post-embryonic plant morphogenesis	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
BP	GO:0098542	defense response to other organism	IEP	Neighborhood
BP	GO:0099402	plant organ development	IEP	Neighborhood
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Neighborhood
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Neighborhood
BP	GO:1900407	regulation of cellular response to oxidative stress	IEP	Neighborhood
BP	GO:1900409	positive regulation of cellular response to oxidative stress	IEP	Neighborhood
BP	GO:1900865	chloroplast RNA modification	IEP	Neighborhood
BP	GO:1901031	regulation of response to reactive oxygen species	IEP	Neighborhood
BP	GO:1901033	positive regulation of response to reactive oxygen species	IEP	Neighborhood
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Neighborhood
BP	GO:1901575	organic substance catabolic process	IEP	Neighborhood
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Neighborhood
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	Neighborhood
BP	GO:1901668	regulation of superoxide dismutase activity	IEP	Neighborhood
BP	GO:1901671	positive regulation of superoxide dismutase activity	IEP	Neighborhood
BP	GO:1902882	regulation of response to oxidative stress	IEP	Neighborhood
BP	GO:1902884	positive regulation of response to oxidative stress	IEP	Neighborhood
BP	GO:1903725	regulation of phospholipid metabolic process	IEP	Neighborhood
BP	GO:1903726	negative regulation of phospholipid metabolic process	IEP	Neighborhood
BP	GO:1904833	positive regulation of removal of superoxide radicals	IEP	Neighborhood
BP	GO:1905392	plant organ morphogenesis	IEP	Neighborhood
CC	GO:1990904	ribonucleoprotein complex	IEP	Neighborhood
BP	GO:2000121	regulation of removal of superoxide radicals	IEP	Neighborhood
BP	GO:2000379	positive regulation of reactive oxygen species metabolic process	IEP	Neighborhood
BP	GO:2001057	reactive nitrogen species metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR011112	Rho_N	363	394

External Links

No external refs found!

AT1G06190

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation