| BP | GO:0000023 | maltose metabolic process | IEP | Neighborhood |
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| MF | GO:0000175 | 3'-5'-exoribonuclease activity | IEP | Neighborhood |
| BP | GO:0000226 | microtubule cytoskeleton organization | IEP | Neighborhood |
| CC | GO:0000229 | cytoplasmic chromosome | IEP | Neighborhood |
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Neighborhood |
| BP | GO:0000272 | polysaccharide catabolic process | IEP | Neighborhood |
| BP | GO:0000372 | Group I intron splicing | IEP | Neighborhood |
| BP | GO:0000373 | Group II intron splicing | IEP | Neighborhood |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Neighborhood |
| BP | GO:0000376 | RNA splicing, via transesterification reactions with guanosine as nucleophile | IEP | Neighborhood |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Neighborhood |
| BP | GO:0003006 | developmental process involved in reproduction | IEP | Neighborhood |
| MF | GO:0003684 | damaged DNA binding | IEP | Neighborhood |
| MF | GO:0003724 | RNA helicase activity | IEP | Neighborhood |
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Neighborhood |
| MF | GO:0003918 | DNA topoisomerase type II (ATP-hydrolyzing) activity | IEP | Neighborhood |
| MF | GO:0004133 | glycogen debranching enzyme activity | IEP | Neighborhood |
| MF | GO:0004326 | tetrahydrofolylpolyglutamate synthase activity | IEP | Neighborhood |
| MF | GO:0004386 | helicase activity | IEP | Neighborhood |
| MF | GO:0004532 | exoribonuclease activity | IEP | Neighborhood |
| MF | GO:0004556 | alpha-amylase activity | IEP | Neighborhood |
| MF | GO:0004654 | polyribonucleotide nucleotidyltransferase activity | IEP | Neighborhood |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Neighborhood |
| MF | GO:0004817 | cysteine-tRNA ligase activity | IEP | Neighborhood |
| MF | GO:0004820 | glycine-tRNA ligase activity | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Neighborhood |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | Neighborhood |
| BP | GO:0005982 | starch metabolic process | IEP | Neighborhood |
| BP | GO:0005984 | disaccharide metabolic process | IEP | Neighborhood |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | Neighborhood |
| BP | GO:0006081 | cellular aldehyde metabolic process | IEP | Neighborhood |
| BP | GO:0006082 | organic acid metabolic process | IEP | Neighborhood |
| BP | GO:0006090 | pyruvate metabolic process | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006265 | DNA topological change | IEP | Neighborhood |
| BP | GO:0006298 | mismatch repair | IEP | Neighborhood |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
| BP | GO:0006396 | RNA processing | IEP | Neighborhood |
| BP | GO:0006399 | tRNA metabolic process | IEP | Neighborhood |
| BP | GO:0006400 | tRNA modification | IEP | Neighborhood |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Neighborhood |
| BP | GO:0006419 | alanyl-tRNA aminoacylation | IEP | Neighborhood |
| BP | GO:0006423 | cysteinyl-tRNA aminoacylation | IEP | Neighborhood |
| BP | GO:0006426 | glycyl-tRNA aminoacylation | IEP | Neighborhood |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0006629 | lipid metabolic process | IEP | Neighborhood |
| BP | GO:0006644 | phospholipid metabolic process | IEP | Neighborhood |
| BP | GO:0006650 | glycerophospholipid metabolic process | IEP | Neighborhood |
| BP | GO:0006655 | phosphatidylglycerol biosynthetic process | IEP | Neighborhood |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | Neighborhood |
| BP | GO:0006721 | terpenoid metabolic process | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0006730 | one-carbon metabolic process | IEP | Neighborhood |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0006783 | heme biosynthetic process | IEP | Neighborhood |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | Neighborhood |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0006996 | organelle organization | IEP | Neighborhood |
| BP | GO:0007005 | mitochondrion organization | IEP | Neighborhood |
| BP | GO:0007006 | mitochondrial membrane organization | IEP | Neighborhood |
| BP | GO:0007007 | inner mitochondrial membrane organization | IEP | Neighborhood |
| BP | GO:0007010 | cytoskeleton organization | IEP | Neighborhood |
| BP | GO:0007017 | microtubule-based process | IEP | Neighborhood |
| BP | GO:0007020 | microtubule nucleation | IEP | Neighborhood |
| BP | GO:0007275 | multicellular organism development | IEP | Neighborhood |
| MF | GO:0008026 | ATP-dependent helicase activity | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | Neighborhood |
| BP | GO:0008356 | asymmetric cell division | IEP | Neighborhood |
| BP | GO:0008380 | RNA splicing | IEP | Neighborhood |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Neighborhood |
| BP | GO:0008610 | lipid biosynthetic process | IEP | Neighborhood |
| BP | GO:0008654 | phospholipid biosynthetic process | IEP | Neighborhood |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0009240 | isopentenyl diphosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0009250 | glucan biosynthetic process | IEP | Neighborhood |
| CC | GO:0009295 | nucleoid | IEP | Neighborhood |
| BP | GO:0009303 | rRNA transcription | IEP | Neighborhood |
| BP | GO:0009311 | oligosaccharide metabolic process | IEP | Neighborhood |
| CC | GO:0009330 | DNA topoisomerase complex (ATP-hydrolyzing) | IEP | Neighborhood |
| BP | GO:0009451 | RNA modification | IEP | Neighborhood |
| CC | GO:0009507 | chloroplast | IEP | Neighborhood |
| CC | GO:0009508 | plastid chromosome | IEP | Neighborhood |
| CC | GO:0009526 | plastid envelope | IEP | Neighborhood |
| CC | GO:0009532 | plastid stroma | IEP | Neighborhood |
| CC | GO:0009536 | plastid | IEP | Neighborhood |
| CC | GO:0009570 | chloroplast stroma | IEP | Neighborhood |
| BP | GO:0009657 | plastid organization | IEP | Neighborhood |
| BP | GO:0009658 | chloroplast organization | IEP | Neighborhood |
| BP | GO:0009668 | plastid membrane organization | IEP | Neighborhood |
| BP | GO:0009790 | embryo development | IEP | Neighborhood |
| BP | GO:0009793 | embryo development ending in seed dormancy | IEP | Neighborhood |
| BP | GO:0009895 | negative regulation of catabolic process | IEP | Neighborhood |
| BP | GO:0009902 | chloroplast relocation | IEP | Neighborhood |
| CC | GO:0009941 | chloroplast envelope | IEP | Neighborhood |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Neighborhood |
| BP | GO:0010020 | chloroplast fission | IEP | Neighborhood |
| BP | GO:0010021 | amylopectin biosynthetic process | IEP | Neighborhood |
| BP | GO:0010027 | thylakoid membrane organization | IEP | Neighborhood |
| BP | GO:0010098 | suspensor development | IEP | Neighborhood |
| BP | GO:0010103 | stomatal complex morphogenesis | IEP | Neighborhood |
| BP | GO:0010197 | polar nucleus fusion | IEP | Neighborhood |
| BP | GO:0010228 | vegetative to reproductive phase transition of meristem | IEP | Neighborhood |
| BP | GO:0010322 | regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | IEP | Neighborhood |
| BP | GO:0010323 | negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | IEP | Neighborhood |
| CC | GO:0010368 | chloroplast isoamylase complex | IEP | Neighborhood |
| CC | GO:0010494 | cytoplasmic stress granule | IEP | Neighborhood |
| BP | GO:0010496 | intercellular transport | IEP | Neighborhood |
| BP | GO:0010497 | plasmodesmata-mediated intercellular transport | IEP | Neighborhood |
| BP | GO:0010608 | posttranscriptional regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010675 | regulation of cellular carbohydrate metabolic process | IEP | Neighborhood |
| BP | GO:0010677 | negative regulation of cellular carbohydrate metabolic process | IEP | Neighborhood |
| BP | GO:0016043 | cellular component organization | IEP | Neighborhood |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
| BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
| BP | GO:0016108 | tetraterpenoid metabolic process | IEP | Neighborhood |
| BP | GO:0016109 | tetraterpenoid biosynthetic process | IEP | Neighborhood |
| BP | GO:0016114 | terpenoid biosynthetic process | IEP | Neighborhood |
| BP | GO:0016116 | carotenoid metabolic process | IEP | Neighborhood |
| BP | GO:0016117 | carotenoid biosynthetic process | IEP | Neighborhood |
| BP | GO:0016119 | carotene metabolic process | IEP | Neighborhood |
| BP | GO:0016120 | carotene biosynthetic process | IEP | Neighborhood |
| BP | GO:0016122 | xanthophyll metabolic process | IEP | Neighborhood |
| BP | GO:0016123 | xanthophyll biosynthetic process | IEP | Neighborhood |
| BP | GO:0016144 | S-glycoside biosynthetic process | IEP | Neighborhood |
| MF | GO:0016160 | amylase activity | IEP | Neighborhood |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | Neighborhood |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Neighborhood |
| BP | GO:0016556 | mRNA modification | IEP | Neighborhood |
| MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
| MF | GO:0016796 | exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Neighborhood |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Neighborhood |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Neighborhood |
| MF | GO:0016874 | ligase activity | IEP | Neighborhood |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Neighborhood |
| MF | GO:0016881 | acid-amino acid ligase activity | IEP | Neighborhood |
| MF | GO:0016887 | ATPase activity | IEP | Neighborhood |
| MF | GO:0016896 | exoribonuclease activity, producing 5'-phosphomonoesters | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Neighborhood |
| MF | GO:0019156 | isoamylase activity | IEP | Neighborhood |
| BP | GO:0019252 | starch biosynthetic process | IEP | Neighborhood |
| BP | GO:0019288 | isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | IEP | Neighborhood |
| BP | GO:0019637 | organophosphate metabolic process | IEP | Neighborhood |
| BP | GO:0019682 | glyceraldehyde-3-phosphate metabolic process | IEP | Neighborhood |
| BP | GO:0019747 | regulation of isoprenoid metabolic process | IEP | Neighborhood |
| BP | GO:0019750 | chloroplast localization | IEP | Neighborhood |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Neighborhood |
| BP | GO:0019758 | glycosinolate biosynthetic process | IEP | Neighborhood |
| BP | GO:0019761 | glucosinolate biosynthetic process | IEP | Neighborhood |
| CC | GO:0019866 | organelle inner membrane | IEP | Neighborhood |
| BP | GO:0022414 | reproductive process | IEP | Neighborhood |
| BP | GO:0022607 | cellular component assembly | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | Neighborhood |
| BP | GO:0031329 | regulation of cellular catabolic process | IEP | Neighborhood |
| BP | GO:0031330 | negative regulation of cellular catabolic process | IEP | Neighborhood |
| BP | GO:0031425 | chloroplast RNA processing | IEP | Neighborhood |
| CC | GO:0031967 | organelle envelope | IEP | Neighborhood |
| CC | GO:0031975 | envelope | IEP | Neighborhood |
| BP | GO:0032501 | multicellular organismal process | IEP | Neighborhood |
| BP | GO:0032502 | developmental process | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Neighborhood |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Neighborhood |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Neighborhood |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | Neighborhood |
| BP | GO:0034470 | ncRNA processing | IEP | Neighborhood |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| CC | GO:0035770 | ribonucleoprotein granule | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| CC | GO:0036464 | cytoplasmic ribonucleoprotein granule | IEP | Neighborhood |
| BP | GO:0042214 | terpene metabolic process | IEP | Neighborhood |
| BP | GO:0042407 | cristae formation | IEP | Neighborhood |
| BP | GO:0042440 | pigment metabolic process | IEP | Neighborhood |
| MF | GO:0042623 | ATPase activity, coupled | IEP | Neighborhood |
| BP | GO:0042793 | plastid transcription | IEP | Neighborhood |
| BP | GO:0042794 | plastid rRNA transcription | IEP | Neighborhood |
| CC | GO:0043033 | isoamylase complex | IEP | Neighborhood |
| BP | GO:0043038 | amino acid activation | IEP | Neighborhood |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Neighborhood |
| BP | GO:0043085 | positive regulation of catalytic activity | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Neighborhood |
| BP | GO:0043487 | regulation of RNA stability | IEP | Neighborhood |
| BP | GO:0043488 | regulation of mRNA stability | IEP | Neighborhood |
| BP | GO:0043489 | RNA stabilization | IEP | Neighborhood |
| BP | GO:0043572 | plastid fission | IEP | Neighborhood |
| BP | GO:0044042 | glucan metabolic process | IEP | Neighborhood |
| BP | GO:0044093 | positive regulation of molecular function | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Neighborhood |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Neighborhood |
| CC | GO:0044422 | organelle part | IEP | Neighborhood |
| CC | GO:0044434 | chloroplast part | IEP | Neighborhood |
| CC | GO:0044435 | plastid part | IEP | Neighborhood |
| CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
| BP | GO:0045017 | glycerolipid biosynthetic process | IEP | Neighborhood |
| BP | GO:0045036 | protein targeting to chloroplast | IEP | Neighborhood |
| BP | GO:0045037 | protein import into chloroplast stroma | IEP | Neighborhood |
| BP | GO:0045827 | negative regulation of isoprenoid metabolic process | IEP | Neighborhood |
| BP | GO:0045833 | negative regulation of lipid metabolic process | IEP | Neighborhood |
| BP | GO:0045912 | negative regulation of carbohydrate metabolic process | IEP | Neighborhood |
| BP | GO:0045995 | regulation of embryonic development | IEP | Neighborhood |
| BP | GO:0046148 | pigment biosynthetic process | IEP | Neighborhood |
| BP | GO:0046246 | terpene biosynthetic process | IEP | Neighborhood |
| BP | GO:0046471 | phosphatidylglycerol metabolic process | IEP | Neighborhood |
| BP | GO:0046474 | glycerophospholipid biosynthetic process | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| BP | GO:0046486 | glycerolipid metabolic process | IEP | Neighborhood |
| BP | GO:0046490 | isopentenyl diphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0046777 | protein autophosphorylation | IEP | Neighborhood |
| BP | GO:0046890 | regulation of lipid biosynthetic process | IEP | Neighborhood |
| BP | GO:0048255 | mRNA stabilization | IEP | Neighborhood |
| BP | GO:0048481 | plant ovule development | IEP | Neighborhood |
| BP | GO:0048856 | anatomical structure development | IEP | Neighborhood |
| BP | GO:0050790 | regulation of catalytic activity | IEP | Neighborhood |
| BP | GO:0051055 | negative regulation of lipid biosynthetic process | IEP | Neighborhood |
| BP | GO:0051640 | organelle localization | IEP | Neighborhood |
| BP | GO:0051641 | cellular localization | IEP | Neighborhood |
| BP | GO:0051644 | plastid localization | IEP | Neighborhood |
| BP | GO:0051649 | establishment of localization in cell | IEP | Neighborhood |
| BP | GO:0051656 | establishment of organelle localization | IEP | Neighborhood |
| BP | GO:0051667 | establishment of plastid localization | IEP | Neighborhood |
| BP | GO:0061013 | regulation of mRNA catabolic process | IEP | Neighborhood |
| BP | GO:0061024 | membrane organization | IEP | Neighborhood |
| MF | GO:0061505 | DNA topoisomerase II activity | IEP | Neighborhood |
| BP | GO:0062014 | negative regulation of small molecule metabolic process | IEP | Neighborhood |
| BP | GO:0065009 | regulation of molecular function | IEP | Neighborhood |
| MF | GO:0070035 | purine NTP-dependent helicase activity | IEP | Neighborhood |
| BP | GO:0071071 | regulation of phospholipid biosynthetic process | IEP | Neighborhood |
| BP | GO:0071072 | negative regulation of phospholipid biosynthetic process | IEP | Neighborhood |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
| BP | GO:0072596 | establishment of protein localization to chloroplast | IEP | Neighborhood |
| BP | GO:0072598 | protein localization to chloroplast | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| BP | GO:0090351 | seedling development | IEP | Neighborhood |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0090626 | plant epidermis morphogenesis | IEP | Neighborhood |
| BP | GO:0090698 | post-embryonic plant morphogenesis | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:0098781 | ncRNA transcription | IEP | Neighborhood |
| BP | GO:0099402 | plant organ development | IEP | Neighborhood |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Neighborhood |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | Neighborhood |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| BP | GO:1901659 | glycosyl compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1902369 | negative regulation of RNA catabolic process | IEP | Neighborhood |
| BP | GO:1902373 | negative regulation of mRNA catabolic process | IEP | Neighborhood |
| BP | GO:1903311 | regulation of mRNA metabolic process | IEP | Neighborhood |
| BP | GO:1903312 | negative regulation of mRNA metabolic process | IEP | Neighborhood |
| BP | GO:1903725 | regulation of phospholipid metabolic process | IEP | Neighborhood |
| BP | GO:1903726 | negative regulation of phospholipid metabolic process | IEP | Neighborhood |
| BP | GO:2000896 | amylopectin metabolic process | IEP | Neighborhood |