AT1G72570


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG0000068 (Archaeplastida) Phylogenetic Tree(s): OG0000068_tree ,
OG_05_0000090 (LandPlants) Phylogenetic Tree(s): OG_05_0000090_tree ,
OG_06_0000054 (SeedPlants) Phylogenetic Tree(s): OG_06_0000054_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G72570
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00077750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00101p00022740 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AT3G54990 SMZ Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT5G65510 AIL7 AINTEGUMENTA-like 7 0.03 Archaeplastida
AT5G67180 TOE3 target of early activation tagged (EAT) 3 0.04 Archaeplastida
Cre08.g385350 No alias No description available 0.01 Archaeplastida
Cre10.g441300 No alias AP2-like ethylene-responsive transcription factor ANT... 0.02 Archaeplastida
GSVIVT01004382001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01016097001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01023697001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01025307001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
Gb_29561 No alias transcription factor (AP2) 0.02 Archaeplastida
LOC_Os01g59780.1 No alias transcription factor (AP2) 0.03 Archaeplastida
LOC_Os01g67410.1 No alias transcription factor (AP2) 0.03 Archaeplastida
LOC_Os02g40070.1 No alias transcription factor (AP2) 0.03 Archaeplastida
LOC_Os03g07940.1 No alias transcription factor (AP2) 0.04 Archaeplastida
LOC_Os03g19900.1 No alias transcription factor (AP2) 0.02 Archaeplastida
LOC_Os06g05340.1 No alias transcription factor (AP2). RAM1-dependent transcription... 0.02 Archaeplastida
LOC_Os06g43220.1 No alias transcription factor (AP2) 0.04 Archaeplastida
LOC_Os06g44750.1 No alias transcription factor (AP2) 0.03 Archaeplastida
LOC_Os11g19060.1 No alias transcription factor (AP2) 0.03 Archaeplastida
LOC_Os12g03290.1 No alias transcription factor (AP2) 0.03 Archaeplastida
MA_10005612g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_121578g0010 No alias transcription factor (AP2) 0.03 Archaeplastida
MA_95471g0010 No alias transcription factor (AP2) 0.04 Archaeplastida
MA_98095g0010 No alias transcription factor (AP2) 0.02 Archaeplastida
Mp7g13270.1 No alias transcription factor (AP2) 0.02 Archaeplastida
Pp3c10_24550V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c12_12460V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c15_4400V3.1 No alias target of early activation tagged (EAT) 2 0.02 Archaeplastida
Solyc01g096860.3.1 No alias transcription factor (AP2) 0.03 Archaeplastida
Solyc03g044300.3.1 No alias transcription factor (AP2) 0.03 Archaeplastida
Solyc05g051380.4.1 No alias transcription factor (AP2) 0.03 Archaeplastida
Solyc11g008560.2.1 No alias transcription factor (AP2) 0.03 Archaeplastida
Solyc11g010710.2.1 No alias transcription factor (AP2) 0.03 Archaeplastida
Zm00001e000558_P003 No alias transcription factor (AP2) 0.03 Archaeplastida
Zm00001e004083_P002 No alias transcription factor (AP2) 0.04 Archaeplastida
Zm00001e024044_P002 No alias transcription factor (AP2) 0.02 Archaeplastida
Zm00001e032754_P003 No alias transcription factor (AP2) 0.03 Archaeplastida
Zm00001e037501_P005 No alias transcription factor (AP2) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity TAS Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005634 nucleus IC Interproscan
BP GO:0006355 regulation of transcription, DNA-templated ISS Interproscan
BP GO:0009686 gibberellin biosynthetic process RCA Interproscan
BP GO:0009887 animal organ morphogenesis ISS Interproscan
Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0003994 aconitate hydratase activity IEP Neighborhood
MF GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity IEP Neighborhood
MF GO:0004383 guanylate cyclase activity IEP Neighborhood
MF GO:0004451 isocitrate lyase activity IEP Neighborhood
MF GO:0004474 malate synthase activity IEP Neighborhood
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Neighborhood
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Neighborhood
MF GO:0005274 allantoin:proton symporter activity IEP Neighborhood
MF GO:0005496 steroid binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005777 peroxisome IEP Neighborhood
BP GO:0006101 citrate metabolic process IEP Neighborhood
BP GO:0006102 isocitrate metabolic process IEP Neighborhood
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Neighborhood
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006635 fatty acid beta-oxidation IEP Neighborhood
BP GO:0006775 fat-soluble vitamin metabolic process IEP Neighborhood
BP GO:0007031 peroxisome organization IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009062 fatty acid catabolic process IEP Neighborhood
BP GO:0009218 pyrimidine ribonucleotide metabolic process IEP Neighborhood
BP GO:0009220 pyrimidine ribonucleotide biosynthetic process IEP Neighborhood
BP GO:0009639 response to red or far red light IEP Neighborhood
BP GO:0009640 photomorphogenesis IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0009737 response to abscisic acid IEP Neighborhood
BP GO:0009739 response to gibberellin IEP Neighborhood
BP GO:0009740 gibberellic acid mediated signaling pathway IEP Neighborhood
BP GO:0009755 hormone-mediated signaling pathway IEP Neighborhood
BP GO:0009756 carbohydrate mediated signaling IEP Neighborhood
BP GO:0009790 embryo development IEP Neighborhood
BP GO:0009793 embryo development ending in seed dormancy IEP Neighborhood
MF GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity IEP Neighborhood
BP GO:0009845 seed germination IEP Neighborhood
BP GO:0009909 regulation of flower development IEP Neighborhood
BP GO:0009933 meristem structural organization IEP Neighborhood
BP GO:0009956 radial pattern formation IEP Neighborhood
MF GO:0009975 cyclase activity IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010038 response to metal ion IEP Neighborhood
BP GO:0010039 response to iron ion IEP Neighborhood
BP GO:0010114 response to red light IEP Neighborhood
BP GO:0010162 seed dormancy process IEP Neighborhood
BP GO:0010182 sugar mediated signaling pathway IEP Neighborhood
BP GO:0010189 vitamin E biosynthetic process IEP Neighborhood
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP Neighborhood
BP GO:0010325 raffinose family oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0010476 gibberellin mediated signaling pathway IEP Neighborhood
BP GO:0015720 allantoin transport IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016615 malate dehydrogenase activity IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0016707 gibberellin 3-beta-dioxygenase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016833 oxo-acid-lyase activity IEP Neighborhood
MF GO:0016849 phosphorus-oxygen lyase activity IEP Neighborhood
BP GO:0019217 regulation of fatty acid metabolic process IEP Neighborhood
BP GO:0019395 fatty acid oxidation IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
BP GO:0019915 lipid storage IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0022611 dormancy process IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
BP GO:0031998 regulation of fatty acid beta-oxidation IEP Neighborhood
BP GO:0032365 intracellular lipid transport IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
MF GO:0032934 sterol binding IEP Neighborhood
BP GO:0033993 response to lipid IEP Neighborhood
BP GO:0034440 lipid oxidation IEP Neighborhood
BP GO:0040019 positive regulation of embryonic development IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042360 vitamin E metabolic process IEP Neighborhood
BP GO:0042362 fat-soluble vitamin biosynthetic process IEP Neighborhood
CC GO:0042579 microbody IEP Neighborhood
BP GO:0044242 cellular lipid catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
MF GO:0045551 cinnamyl-alcohol dehydrogenase activity IEP Neighborhood
BP GO:0045995 regulation of embryonic development IEP Neighborhood
BP GO:0046320 regulation of fatty acid oxidation IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
BP GO:0046487 glyoxylate metabolic process IEP Neighborhood
BP GO:0046685 response to arsenic-containing substance IEP Neighborhood
BP GO:0046686 response to cadmium ion IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
BP GO:0048444 floral organ morphogenesis IEP Neighborhood
BP GO:0048446 petal morphogenesis IEP Neighborhood
BP GO:0048532 anatomical structure arrangement IEP Neighborhood
BP GO:0048579 negative regulation of long-day photoperiodism, flowering IEP Neighborhood
BP GO:0048580 regulation of post-embryonic development IEP Neighborhood
BP GO:0048586 regulation of long-day photoperiodism, flowering IEP Neighborhood
BP GO:0048609 multicellular organismal reproductive process IEP Neighborhood
BP GO:0048831 regulation of shoot system development IEP Neighborhood
MF GO:0050342 tocopherol O-methyltransferase activity IEP Neighborhood
BP GO:0050826 response to freezing IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0050994 regulation of lipid catabolic process IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051239 regulation of multicellular organismal process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0060771 phyllotactic patterning IEP Neighborhood
BP GO:0060772 leaf phyllotactic patterning IEP Neighborhood
BP GO:0060774 auxin mediated signaling pathway involved in phyllotactic patterning IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0070026 nitric oxide binding IEP Neighborhood
BP GO:0070542 response to fatty acid IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071398 cellular response to fatty acid IEP Neighborhood
BP GO:0071732 cellular response to nitric oxide IEP Neighborhood
BP GO:0072329 monocarboxylic acid catabolic process IEP Neighborhood
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Neighborhood
BP GO:0080093 regulation of photorespiration IEP Neighborhood
BP GO:0080167 response to karrikin IEP Neighborhood
BP GO:0090332 stomatal closure IEP Neighborhood
BP GO:0090697 post-embryonic plant organ morphogenesis IEP Neighborhood
BP GO:0097305 response to alcohol IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
BP GO:2000026 regulation of multicellular organismal development IEP Neighborhood
BP GO:2000028 regulation of photoperiodism, flowering IEP Neighborhood
BP GO:2000241 regulation of reproductive process IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 222 281
IPR001471 AP2/ERF_dom 324 375
No external refs found!