AT2G21660 (CCR2, ATGRP7, GRP7, GR-RBP7)


Aliases : CCR2, ATGRP7, GRP7, GR-RBP7

Description : cold, circadian rhythm, and rna binding 2


Gene families : OG0000043 (Archaeplastida) Phylogenetic Tree(s): OG0000043_tree ,
OG_05_0000481 (LandPlants) Phylogenetic Tree(s): OG_05_0000481_tree ,
OG_06_0001149 (SeedPlants) Phylogenetic Tree(s): OG_06_0001149_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G21660
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000826.12 No alias Glycine-rich RNA-binding protein 4, mitochondrial... 0.02 Archaeplastida
Cre17.g725301 No alias No description available 0.01 Archaeplastida
GSVIVT01025020001 No alias No description available 0.07 Archaeplastida
MA_14910g0010 No alias No annotation 0.02 Archaeplastida
Pp3c4_6610V3.1 No alias glycine-rich RNA-binding protein 3 0.03 Archaeplastida
Smo406315 No alias Glycine-rich RNA-binding protein 2, mitochondrial... 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000380 alternative mRNA splicing, via spliceosome IMP Interproscan
MF GO:0003690 double-stranded DNA binding IDA Interproscan
MF GO:0003697 single-stranded DNA binding IDA Interproscan
MF GO:0003723 RNA binding IDA Interproscan
MF GO:0003723 RNA binding ISS Interproscan
MF GO:0003729 mRNA binding IDA Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005737 cytoplasm IDA Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
CC GO:0005777 peroxisome IDA Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:0006094 gluconeogenesis RCA Interproscan
BP GO:0006096 glycolytic process RCA Interproscan
BP GO:0006406 mRNA export from nucleus IMP Interproscan
BP GO:0006833 water transport RCA Interproscan
BP GO:0006970 response to osmotic stress IMP Interproscan
BP GO:0006972 hyperosmotic response RCA Interproscan
BP GO:0007030 Golgi organization RCA Interproscan
BP GO:0007623 circadian rhythm IEP Interproscan
BP GO:0007623 circadian rhythm RCA Interproscan
BP GO:0007623 circadian rhythm TAS Interproscan
BP GO:0009266 response to temperature stimulus RCA Interproscan
BP GO:0009409 response to cold IGI Interproscan
BP GO:0009409 response to cold IEP Interproscan
BP GO:0009414 response to water deprivation IEP Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
CC GO:0009507 chloroplast IDA Interproscan
BP GO:0009651 response to salt stress IEP Interproscan
BP GO:0009651 response to salt stress RCA Interproscan
BP GO:0009735 response to cytokinin IDA Interproscan
BP GO:0010043 response to zinc ion IEP Interproscan
BP GO:0010119 regulation of stomatal movement IMP Interproscan
BP GO:0010228 vegetative to reproductive phase transition of meristem IMP Interproscan
BP GO:0010228 vegetative to reproductive phase transition of meristem RCA Interproscan
BP GO:0010501 RNA secondary structure unwinding IDA Interproscan
BP GO:0032508 DNA duplex unwinding IDA Interproscan
BP GO:0045087 innate immune response IDA Interproscan
BP GO:0045087 innate immune response IMP Interproscan
BP GO:0046686 response to cadmium ion IEP Interproscan
BP GO:0046686 response to cadmium ion RCA Interproscan
CC GO:0048046 apoplast IDA Interproscan
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
CC GO:0000785 chromatin IEP Neighborhood
MF GO:0001047 core promoter binding IEP Neighborhood
MF GO:0001067 regulatory region nucleic acid binding IEP Neighborhood
BP GO:0001932 regulation of protein phosphorylation IEP Neighborhood
BP GO:0001933 negative regulation of protein phosphorylation IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
BP GO:0005513 detection of calcium ion IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP Neighborhood
CC GO:0005747 mitochondrial respiratory chain complex I IEP Neighborhood
BP GO:0006007 glucose catabolic process IEP Neighborhood
BP GO:0006301 postreplication repair IEP Neighborhood
BP GO:0006469 negative regulation of protein kinase activity IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
MF GO:0008320 protein transmembrane transporter activity IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
CC GO:0009526 plastid envelope IEP Neighborhood
BP GO:0009593 detection of chemical stimulus IEP Neighborhood
BP GO:0009612 response to mechanical stimulus IEP Neighborhood
BP GO:0009649 entrainment of circadian clock IEP Neighborhood
BP GO:0009741 response to brassinosteroid IEP Neighborhood
BP GO:0009804 coumarin metabolic process IEP Neighborhood
BP GO:0009805 coumarin biosynthetic process IEP Neighborhood
BP GO:0009909 regulation of flower development IEP Neighborhood
BP GO:0009911 positive regulation of flower development IEP Neighborhood
CC GO:0009941 chloroplast envelope IEP Neighborhood
BP GO:0010017 red or far-red light signaling pathway IEP Neighborhood
BP GO:0010440 stomatal lineage progression IEP Neighborhood
BP GO:0010563 negative regulation of phosphorus metabolic process IEP Neighborhood
MF GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity IEP Neighborhood
BP GO:0017001 antibiotic catabolic process IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019210 kinase inhibitor activity IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019320 hexose catabolic process IEP Neighborhood
BP GO:0019722 calcium-mediated signaling IEP Neighborhood
BP GO:0019932 second-messenger-mediated signaling IEP Neighborhood
MF GO:0022884 macromolecule transmembrane transporter activity IEP Neighborhood
BP GO:0030029 actin filament-based process IEP Neighborhood
BP GO:0030048 actin filament-based movement IEP Neighborhood
CC GO:0030964 NADH dehydrogenase complex IEP Neighborhood
BP GO:0031400 negative regulation of protein modification process IEP Neighborhood
CC GO:0031967 organelle envelope IEP Neighborhood
CC GO:0031975 envelope IEP Neighborhood
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0033673 negative regulation of kinase activity IEP Neighborhood
BP GO:0033993 response to lipid IEP Neighborhood
BP GO:0042325 regulation of phosphorylation IEP Neighborhood
BP GO:0042326 negative regulation of phosphorylation IEP Neighborhood
BP GO:0042744 hydrogen peroxide catabolic process IEP Neighborhood
BP GO:0042752 regulation of circadian rhythm IEP Neighborhood
BP GO:0042753 positive regulation of circadian rhythm IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
MF GO:0042887 amide transmembrane transporter activity IEP Neighborhood
BP GO:0043086 negative regulation of catalytic activity IEP Neighborhood
BP GO:0043549 regulation of kinase activity IEP Neighborhood
BP GO:0044092 negative regulation of molecular function IEP Neighborhood
MF GO:0044212 transcription regulatory region DNA binding IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045271 respiratory chain complex I IEP Neighborhood
BP GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
BP GO:0045786 negative regulation of cell cycle IEP Neighborhood
BP GO:0045859 regulation of protein kinase activity IEP Neighborhood
BP GO:0045936 negative regulation of phosphate metabolic process IEP Neighborhood
BP GO:0046365 monosaccharide catabolic process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048580 regulation of post-embryonic development IEP Neighborhood
BP GO:0048582 positive regulation of post-embryonic development IEP Neighborhood
BP GO:0048831 regulation of shoot system development IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051094 positive regulation of developmental process IEP Neighborhood
BP GO:0051239 regulation of multicellular organismal process IEP Neighborhood
BP GO:0051240 positive regulation of multicellular organismal process IEP Neighborhood
BP GO:0051248 negative regulation of protein metabolic process IEP Neighborhood
BP GO:0051338 regulation of transferase activity IEP Neighborhood
BP GO:0051348 negative regulation of transferase activity IEP Neighborhood
BP GO:0051592 response to calcium ion IEP Neighborhood
BP GO:0051645 Golgi localization IEP Neighborhood
BP GO:0051646 mitochondrion localization IEP Neighborhood
BP GO:0060151 peroxisome localization IEP Neighborhood
BP GO:0071478 cellular response to radiation IEP Neighborhood
BP GO:0071482 cellular response to light stimulus IEP Neighborhood
BP GO:0071489 cellular response to red or far red light IEP Neighborhood
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Neighborhood
BP GO:0071901 negative regulation of protein serine/threonine kinase activity IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097472 cyclin-dependent protein kinase activity IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Neighborhood
BP GO:1904030 negative regulation of cyclin-dependent protein kinase activity IEP Neighborhood
MF GO:1904680 peptide transmembrane transporter activity IEP Neighborhood
BP GO:2000026 regulation of multicellular organismal development IEP Neighborhood
BP GO:2000241 regulation of reproductive process IEP Neighborhood
BP GO:2000243 positive regulation of reproductive process IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 11 79
No external refs found!