AT2G28610 (WOX3, PRS1, PRS)

Aliases : WOX3, PRS1, PRS

Description : Homeodomain-like superfamily protein

Gene families : OG0000425 (Archaeplastida) Phylogenetic Tree(s): OG0000425_tree ,
OG_05_0000212 (LandPlants) Phylogenetic Tree(s): OG_05_0000212_tree ,
OG_06_0000309 (SeedPlants) Phylogenetic Tree(s): OG_06_0000309_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G28610
Cluster	HCCA: Cluster_36

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00122680	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
AMTR_s00012p00149750	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.06	Archaeplastida
AMTR_s00021p00189010	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.05	Archaeplastida
AMTR_s00023p00181320	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.04	Archaeplastida
AMTR_s00051p00020930	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
AT2G01500	PFS2, HOS9, WOX6	Homeodomain-like superfamily protein	0.06	Archaeplastida
AT2G33880	STIP, HB-3, WOX9	homeobox-3	0.08	Archaeplastida
AT3G11260	WOX5	WUSCHEL related homeobox 5	0.04	Archaeplastida
AT5G05770	WOX7	WUSCHEL related homeobox 7	0.04	Archaeplastida
AT5G17810	WOX12	WUSCHEL related homeobox 12	0.03	Archaeplastida
AT5G46010	No alias	Homeodomain-like superfamily protein	0.04	Archaeplastida
GSVIVT01008424001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.06	Archaeplastida
GSVIVT01009453001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.05	Archaeplastida
GSVIVT01025075001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
GSVIVT01029942001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.04	Archaeplastida
Gb_12294	No alias	transcription factor (WOX)	0.02	Archaeplastida
Gb_27283	No alias	transcription factor (WOX)	0.03	Archaeplastida
LOC_Os01g62310.1	No alias	transcription factor (WOX)	0.03	Archaeplastida
LOC_Os04g56780.1	No alias	transcription factor (WOX)	0.05	Archaeplastida
LOC_Os05g02730.1	No alias	transcription factor (WOX)	0.12	Archaeplastida
LOC_Os05g48990.1	No alias	transcription factor (WOX)	0.13	Archaeplastida
LOC_Os07g48560.1	No alias	transcription factor (WOX)	0.05	Archaeplastida
MA_10234279g0010	No alias	transcription factor (WOX)	0.02	Archaeplastida
MA_10344604g0010	No alias	transcription factor (WOX)	0.03	Archaeplastida
MA_8832398g0010	No alias	transcription factor (WOX)	0.04	Archaeplastida
MA_8850184g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_921642g0010	No alias	transcription factor (WOX)	0.02	Archaeplastida
Solyc02g077390.2.1	No alias	transcription factor (WOX)	0.05	Archaeplastida
Solyc03g118770.4.1	No alias	transcription factor (WOX)	0.04	Archaeplastida
Solyc06g075567.1.1	No alias	transcription factor (WOX)	0.05	Archaeplastida
Solyc11g072770.2.1	No alias	transcription factor (WOX)	0.08	Archaeplastida
Solyc11g072790.2.1	No alias	transcription factor (WOX)	0.03	Archaeplastida
Zm00001e006644_P002	No alias	transcription factor (WOX)	0.07	Archaeplastida
Zm00001e009121_P001	No alias	transcription factor (WOX)	0.07	Archaeplastida
Zm00001e024169_P001	No alias	transcription factor (WOX)	0.13	Archaeplastida
Zm00001e029534_P001	No alias	transcription factor (WOX)	0.09	Archaeplastida
Zm00001e032433_P003	No alias	transcription factor (WOX)	0.09	Archaeplastida
Zm00001e041785_P001	No alias	transcription factor (WOX)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	TAS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	ISS	Interproscan
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008283	cell proliferation	IMP	Interproscan
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009798	axis specification	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009908	flower development	IMP	Interproscan
BP	GO:0009943	adaxial/abaxial axis specification	IMP	Interproscan
BP	GO:0009947	centrolateral axis specification	IMP	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010865	stipule development	IMP	Interproscan
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0048367	shoot system development	None	Extended
BP	GO:0048513	animal organ development	IGI	Interproscan
BP	GO:0048608	reproductive structure development	None	Extended
BP	GO:0048731	system development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090567	reproductive shoot system development	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEP	Neighborhood
BP	GO:0000160	phosphorelay signal transduction system	IEP	Neighborhood
BP	GO:0001763	morphogenesis of a branching structure	IEP	Neighborhood
BP	GO:0002237	response to molecule of bacterial origin	IEP	Neighborhood
BP	GO:0003002	regionalization	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003756	protein disulfide isomerase activity	IEP	Neighborhood
MF	GO:0003968	RNA-directed 5'-3' RNA polymerase activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
CC	GO:0005654	nucleoplasm	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
BP	GO:0007275	multicellular organism development	IEP	Neighborhood
MF	GO:0008134	transcription factor binding	IEP	Neighborhood
BP	GO:0009410	response to xenobiotic stimulus	IEP	Neighborhood
BP	GO:0009648	photoperiodism	IEP	Neighborhood
BP	GO:0009653	anatomical structure morphogenesis	IEP	Neighborhood
BP	GO:0009719	response to endogenous stimulus	IEP	Neighborhood
BP	GO:0009725	response to hormone	IEP	Neighborhood
BP	GO:0009736	cytokinin-activated signaling pathway	IEP	Neighborhood
BP	GO:0009737	response to abscisic acid	IEP	Neighborhood
BP	GO:0009740	gibberellic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009755	hormone-mediated signaling pathway	IEP	Neighborhood
BP	GO:0009790	embryo development	IEP	Neighborhood
BP	GO:0009793	embryo development ending in seed dormancy	IEP	Neighborhood
BP	GO:0009799	specification of symmetry	IEP	Neighborhood
BP	GO:0009845	seed germination	IEP	Neighborhood
BP	GO:0009850	auxin metabolic process	IEP	Neighborhood
BP	GO:0009851	auxin biosynthetic process	IEP	Neighborhood
BP	GO:0009855	determination of bilateral symmetry	IEP	Neighborhood
BP	GO:0009886	post-embryonic animal morphogenesis	IEP	Neighborhood
BP	GO:0009888	tissue development	IEP	Neighborhood
BP	GO:0009909	regulation of flower development	IEP	Neighborhood
BP	GO:0009911	positive regulation of flower development	IEP	Neighborhood
BP	GO:0009933	meristem structural organization	IEP	Neighborhood
BP	GO:0009965	leaf morphogenesis	IEP	Neighborhood
BP	GO:0010014	meristem initiation	IEP	Neighborhood
BP	GO:0010022	meristem determinacy	IEP	Neighborhood
BP	GO:0010033	response to organic substance	IEP	Neighborhood
BP	GO:0010077	maintenance of inflorescence meristem identity	IEP	Neighborhood
BP	GO:0010093	specification of floral organ identity	IEP	Neighborhood
BP	GO:0010094	specification of carpel identity	IEP	Neighborhood
BP	GO:0010103	stomatal complex morphogenesis	IEP	Neighborhood
BP	GO:0010154	fruit development	IEP	Neighborhood
BP	GO:0010158	abaxial cell fate specification	IEP	Neighborhood
BP	GO:0010159	specification of animal organ position	IEP	Neighborhood
BP	GO:0010160	formation of animal organ boundary	IEP	Neighborhood
BP	GO:0010162	seed dormancy process	IEP	Neighborhood
BP	GO:0010199	organ boundary specification between lateral organs and the meristem	IEP	Neighborhood
BP	GO:0010223	secondary shoot formation	IEP	Neighborhood
BP	GO:0010229	inflorescence development	IEP	Neighborhood
BP	GO:0010338	leaf formation	IEP	Neighborhood
BP	GO:0010346	shoot axis formation	IEP	Neighborhood
BP	GO:0010450	inflorescence meristem growth	IEP	Neighborhood
BP	GO:0010476	gibberellin mediated signaling pathway	IEP	Neighborhood
BP	GO:0010582	floral meristem determinacy	IEP	Neighborhood
BP	GO:0010608	posttranscriptional regulation of gene expression	IEP	Neighborhood
BP	GO:0010629	negative regulation of gene expression	IEP	Neighborhood
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Neighborhood
BP	GO:0016441	posttranscriptional gene silencing	IEP	Neighborhood
MF	GO:0016779	nucleotidyltransferase activity	IEP	Neighborhood
MF	GO:0016864	intramolecular oxidoreductase activity, transposing S-S bonds	IEP	Neighborhood
BP	GO:0022603	regulation of anatomical structure morphogenesis	IEP	Neighborhood
BP	GO:0022611	dormancy process	IEP	Neighborhood
BP	GO:0030968	endoplasmic reticulum unfolded protein response	IEP	Neighborhood
BP	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	IEP	Neighborhood
MF	GO:0031490	chromatin DNA binding	IEP	Neighborhood
BP	GO:0032504	multicellular organism reproduction	IEP	Neighborhood
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Neighborhood
BP	GO:0035265	organ growth	IEP	Neighborhood
BP	GO:0035266	meristem growth	IEP	Neighborhood
BP	GO:0040009	regulation of growth rate	IEP	Neighborhood
BP	GO:0042221	response to chemical	IEP	Neighborhood
MF	GO:0043621	protein self-association	IEP	Neighborhood
BP	GO:0045165	cell fate commitment	IEP	Neighborhood
BP	GO:0045927	positive regulation of growth	IEP	Neighborhood
BP	GO:0046620	regulation of organ growth	IEP	Neighborhood
BP	GO:0046622	positive regulation of organ growth	IEP	Neighborhood
MF	GO:0047434	indolepyruvate decarboxylase activity	IEP	Neighborhood
BP	GO:0048366	leaf development	IEP	Neighborhood
BP	GO:0048437	floral organ development	IEP	Neighborhood
BP	GO:0048438	floral whorl development	IEP	Neighborhood
BP	GO:0048440	carpel development	IEP	Neighborhood
BP	GO:0048441	petal development	IEP	Neighborhood
BP	GO:0048443	stamen development	IEP	Neighborhood
BP	GO:0048444	floral organ morphogenesis	IEP	Neighborhood
BP	GO:0048445	carpel morphogenesis	IEP	Neighborhood
BP	GO:0048446	petal morphogenesis	IEP	Neighborhood
BP	GO:0048448	stamen morphogenesis	IEP	Neighborhood
BP	GO:0048449	floral organ formation	IEP	Neighborhood
BP	GO:0048451	petal formation	IEP	Neighborhood
BP	GO:0048453	sepal formation	IEP	Neighborhood
BP	GO:0048455	stamen formation	IEP	Neighborhood
BP	GO:0048467	gynoecium development	IEP	Neighborhood
BP	GO:0048481	plant ovule development	IEP	Neighborhood
BP	GO:0048507	meristem development	IEP	Neighborhood
BP	GO:0048519	negative regulation of biological process	IEP	Neighborhood
BP	GO:0048532	anatomical structure arrangement	IEP	Neighborhood
BP	GO:0048573	photoperiodism, flowering	IEP	Neighborhood
BP	GO:0048580	regulation of post-embryonic development	IEP	Neighborhood
BP	GO:0048582	positive regulation of post-embryonic development	IEP	Neighborhood
BP	GO:0048609	multicellular organismal reproductive process	IEP	Neighborhood
BP	GO:0048639	positive regulation of developmental growth	IEP	Neighborhood
BP	GO:0048646	anatomical structure formation involved in morphogenesis	IEP	Neighborhood
BP	GO:0048653	anther development	IEP	Neighborhood
BP	GO:0048825	cotyledon development	IEP	Neighborhood
BP	GO:0048827	phyllome development	IEP	Neighborhood
BP	GO:0048831	regulation of shoot system development	IEP	Neighborhood
BP	GO:0048859	formation of anatomical boundary	IEP	Neighborhood
BP	GO:0050793	regulation of developmental process	IEP	Neighborhood
BP	GO:0051094	positive regulation of developmental process	IEP	Neighborhood
BP	GO:0051239	regulation of multicellular organismal process	IEP	Neighborhood
BP	GO:0051240	positive regulation of multicellular organismal process	IEP	Neighborhood
BP	GO:0051782	negative regulation of cell division	IEP	Neighborhood
BP	GO:0090626	plant epidermis morphogenesis	IEP	Neighborhood
BP	GO:0090691	formation of plant organ boundary	IEP	Neighborhood
BP	GO:0090697	post-embryonic plant organ morphogenesis	IEP	Neighborhood
BP	GO:0090698	post-embryonic plant morphogenesis	IEP	Neighborhood
BP	GO:0090701	specification of plant organ identity	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
BP	GO:0097305	response to alcohol	IEP	Neighborhood
MF	GO:0097747	RNA polymerase activity	IEP	Neighborhood
BP	GO:0099402	plant organ development	IEP	Neighborhood
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood
BP	GO:1905392	plant organ morphogenesis	IEP	Neighborhood
BP	GO:1905393	plant organ formation	IEP	Neighborhood
BP	GO:2000024	regulation of leaf development	IEP	Neighborhood
BP	GO:2000026	regulation of multicellular organismal development	IEP	Neighborhood
BP	GO:2000241	regulation of reproductive process	IEP	Neighborhood
BP	GO:2000243	positive regulation of reproductive process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	7	66

External Links

No external refs found!

AT2G28610 (WOX3, PRS1, PRS)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation