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  5. AT2G29670

AT2G29670


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG0003108 (Archaeplastida) Phylogenetic Tree(s): OG0003108_tree ,
OG_05_0002207 (LandPlants) Phylogenetic Tree(s): OG_05_0002207_tree ,
OG_06_0002372 (SeedPlants) Phylogenetic Tree(s): OG_06_0002372_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G29670
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
Pp3c1_4470V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
Smo440903 No alias No description available 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP Neighborhood
BP GO:0000165 MAPK cascade IEP Neighborhood
BP GO:0001505 regulation of neurotransmitter levels IEP Neighborhood
BP GO:0002238 response to molecule of fungal origin IEP Neighborhood
BP GO:0002682 regulation of immune system process IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006544 glycine metabolic process IEP Neighborhood
BP GO:0006546 glycine catabolic process IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006636 unsaturated fatty acid biosynthetic process IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006873 cellular ion homeostasis IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007602 phototransduction IEP Neighborhood
BP GO:0007623 circadian rhythm IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
BP GO:0009071 serine family amino acid catabolic process IEP Neighborhood
BP GO:0009106 lipoate metabolic process IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
CC GO:0009534 chloroplast thylakoid IEP Neighborhood
CC GO:0009535 chloroplast thylakoid membrane IEP Neighborhood
CC GO:0009579 thylakoid IEP Neighborhood
BP GO:0009581 detection of external stimulus IEP Neighborhood
BP GO:0009582 detection of abiotic stimulus IEP Neighborhood
BP GO:0009583 detection of light stimulus IEP Neighborhood
BP GO:0009585 red, far-red light phototransduction IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
BP GO:0009617 response to bacterium IEP Neighborhood
BP GO:0009629 response to gravity IEP Neighborhood
BP GO:0009630 gravitropism IEP Neighborhood
BP GO:0009639 response to red or far red light IEP Neighborhood
BP GO:0009653 anatomical structure morphogenesis IEP Neighborhood
BP GO:0009704 de-etiolation IEP Neighborhood
BP GO:0009718 anthocyanin-containing compound biosynthetic process IEP Neighborhood
BP GO:0009765 photosynthesis, light harvesting IEP Neighborhood
BP GO:0009769 photosynthesis, light harvesting in photosystem II IEP Neighborhood
MF GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity IEP Neighborhood
BP GO:0009817 defense response to fungus, incompatible interaction IEP Neighborhood
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP Neighborhood
BP GO:0009863 salicylic acid mediated signaling pathway IEP Neighborhood
BP GO:0009867 jasmonic acid mediated signaling pathway IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009891 positive regulation of biosynthetic process IEP Neighborhood
BP GO:0009893 positive regulation of metabolic process IEP Neighborhood
BP GO:0009965 leaf morphogenesis IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010017 red or far-red light signaling pathway IEP Neighborhood
BP GO:0010023 proanthocyanidin biosynthetic process IEP Neighborhood
BP GO:0010161 red light signaling pathway IEP Neighborhood
CC GO:0010287 plastoglobule IEP Neighborhood
BP GO:0010310 regulation of hydrogen peroxide metabolic process IEP Neighborhood
BP GO:0010363 regulation of plant-type hypersensitive response IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010600 regulation of auxin biosynthetic process IEP Neighborhood
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010628 positive regulation of gene expression IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0010928 regulation of auxin mediated signaling pathway IEP Neighborhood
BP GO:0010941 regulation of cell death IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016168 chlorophyll binding IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0023014 signal transduction by protein phosphorylation IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
BP GO:0030003 cellular cation homeostasis IEP Neighborhood
CC GO:0030076 light-harvesting complex IEP Neighborhood
BP GO:0030154 cell differentiation IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031325 positive regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031347 regulation of defense response IEP Neighborhood
BP GO:0031348 negative regulation of defense response IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
CC GO:0031976 plastid thylakoid IEP Neighborhood
CC GO:0031984 organelle subcompartment IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032350 regulation of hormone metabolic process IEP Neighborhood
BP GO:0033559 unsaturated fatty acid metabolic process IEP Neighborhood
CC GO:0034357 photosynthetic membrane IEP Neighborhood
BP GO:0035303 regulation of dephosphorylation IEP Neighborhood
BP GO:0035304 regulation of protein dephosphorylation IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0042133 neurotransmitter metabolic process IEP Neighborhood
BP GO:0042135 neurotransmitter catabolic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
CC GO:0042651 thylakoid membrane IEP Neighborhood
BP GO:0042752 regulation of circadian rhythm IEP Neighborhood
BP GO:0043067 regulation of programmed cell death IEP Neighborhood
BP GO:0043207 response to external biotic stimulus IEP Neighborhood
CC GO:0044434 chloroplast part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
BP GO:0044550 secondary metabolite biosynthetic process IEP Neighborhood
BP GO:0045088 regulation of innate immune response IEP Neighborhood
BP GO:0045893 positive regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
BP GO:0046283 anthocyanin-containing compound metabolic process IEP Neighborhood
BP GO:0046885 regulation of hormone biosynthetic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
BP GO:0048511 rhythmic process IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0048571 long-day photoperiodism IEP Neighborhood
BP GO:0048574 long-day photoperiodism, flowering IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0048585 negative regulation of response to stimulus IEP Neighborhood
BP GO:0048869 cellular developmental process IEP Neighborhood
BP GO:0048878 chemical homeostasis IEP Neighborhood
BP GO:0050776 regulation of immune response IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050801 ion homeostasis IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051193 regulation of cofactor metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051254 positive regulation of RNA metabolic process IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
CC GO:0055035 plastid thylakoid membrane IEP Neighborhood
BP GO:0055080 cation homeostasis IEP Neighborhood
BP GO:0055082 cellular chemical homeostasis IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071214 cellular response to abiotic stimulus IEP Neighborhood
BP GO:0071478 cellular response to radiation IEP Neighborhood
BP GO:0071482 cellular response to light stimulus IEP Neighborhood
BP GO:0071489 cellular response to red or far red light IEP Neighborhood
BP GO:0071491 cellular response to red light IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0080134 regulation of response to stress IEP Neighborhood
BP GO:0080135 regulation of cellular response to stress IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
BP GO:0090354 regulation of auxin metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0104004 cellular response to environmental stimulus IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1905392 plant organ morphogenesis IEP Neighborhood
BP GO:2000071 regulation of defense response by callose deposition IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2000377 regulation of reactive oxygen species metabolic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!