Gb_20316

Description : Chitinase 5 OS=Oryza sativa subsp. japonica (sp|q7y1z0|chi5_orysj : 189.0)

Gene families : OG0000104 (Archaeplastida) Phylogenetic Tree(s): OG0000104_tree ,
OG_05_0000272 (LandPlants) Phylogenetic Tree(s): OG_05_0000272_tree ,
OG_06_0000276 (SeedPlants) Phylogenetic Tree(s): OG_06_0000276_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_20316
Cluster	HCCA: Cluster_201

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00243300	evm_27.TU.AmTr_v1...	Endochitinase A2 OS=Pisum sativum	0.03	Archaeplastida
AMTR_s00001p00243570	evm_27.TU.AmTr_v1...	Basic 30 kDa endochitinase OS=Solanum lycopersicum	0.03	Archaeplastida
AMTR_s00001p00243680	evm_27.TU.AmTr_v1...	Chitinase 3 OS=Oryza sativa subsp. japonica	0.03	Archaeplastida
AMTR_s00066p00199730	evm_27.TU.AmTr_v1...	Endochitinase EP3 OS=Arabidopsis thaliana	0.03	Archaeplastida
AT2G43580	No alias	Chitinase family protein	0.02	Archaeplastida
GSVIVT01007190001	No alias	Basic endochitinase OS=Vitis vinifera	0.04	Archaeplastida
GSVIVT01028243001	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica	0.03	Archaeplastida
GSVIVT01035029001	No alias	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.03	Archaeplastida
GSVIVT01038126001	No alias	Endochitinase EP3 OS=Arabidopsis thaliana	0.06	Archaeplastida
Gb_03375	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
Gb_03376	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.05	Archaeplastida
Gb_20764	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
Gb_20767	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.05	Archaeplastida
LOC_Os05g33150.1	No alias	Chitinase 7 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
LOC_Os06g51060.1	No alias	Chitinase 1 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
MA_102538g0010	No alias	Endochitinase A OS=Zea mays (sp\|p29022\|chia_maize : 100.0)	0.02	Archaeplastida
MA_10262473g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_10313114g0010	No alias	Endochitinase B OS=Nicotiana tabacum...	0.02	Archaeplastida
MA_10431378g0010	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
MA_10431378g0020	No alias	Chitinase 6 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
MA_177881g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_295712g0010	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
MA_3814373g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_381956g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_741127g0010	No alias	Endochitinase At2g43610 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_853077g0010	No alias	Chitinase 6 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
MA_9376357g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
Mp2g24440.1	No alias	Endochitinase CH25 OS=Brassica napus...	0.03	Archaeplastida
Mp4g20470.1	No alias	Basic endochitinase B OS=Arabidopsis thaliana...	0.03	Archaeplastida
Mp7g04510.1	No alias	CTL cellulose microfibrils and hemicellulose interaction protein	0.03	Archaeplastida
Pp3c13_4480V3.1	No alias	Chitinase family protein	0.02	Archaeplastida
Pp3c16_17090V3.1	No alias	homolog of carrot EP3-3 chitinase	0.02	Archaeplastida
Smo14768	No alias	Chitinase 2 OS=Oryza sativa subsp. japonica	0.03	Archaeplastida
Solyc02g082920.4.1	No alias	Acidic 26 kDa endochitinase OS=Solanum lycopersicum...	0.03	Archaeplastida
Solyc10g055810.2.1	No alias	Basic 30 kDa endochitinase OS=Solanum lycopersicum...	0.03	Archaeplastida
Solyc10g055820.3.1	No alias	Basic 30 kDa endochitinase OS=Solanum lycopersicum...	0.06	Archaeplastida
Solyc10g068355.1.1	No alias	Endochitinase OS=Solanum tuberosum (sp\|p05315\|chit_soltu : 109.0)	0.02	Archaeplastida
Zm00001e027534_P001	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Zm00001e030152_P001	No alias	Basic endochitinase A OS=Secale cereale...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004568	chitinase activity	IEA	Interproscan
BP	GO:0006022	aminoglycan metabolic process	None	Extended
BP	GO:0006026	aminoglycan catabolic process	None	Extended
BP	GO:0006030	chitin metabolic process	None	Extended
BP	GO:0006032	chitin catabolic process	IEA	Interproscan
BP	GO:0006040	amino sugar metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0016998	cell wall macromolecule catabolic process	IEA	Interproscan
BP	GO:0017144	drug metabolic process	None	Extended
BP	GO:0042737	drug catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046348	amino sugar catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901071	glucosamine-containing compound metabolic process	None	Extended
BP	GO:1901072	glucosamine-containing compound catabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901136	carbohydrate derivative catabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0004420	hydroxymethylglutaryl-CoA reductase (NADPH) activity	IEP	Neighborhood
CC	GO:0005875	microtubule associated complex	IEP	Neighborhood
BP	GO:0006766	vitamin metabolic process	IEP	Neighborhood
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	Neighborhood
BP	GO:0006771	riboflavin metabolic process	IEP	Neighborhood
BP	GO:0006835	dicarboxylic acid transport	IEP	Neighborhood
MF	GO:0008061	chitin binding	IEP	Neighborhood
MF	GO:0008703	5-amino-6-(5-phosphoribosylamino)uracil reductase activity	IEP	Neighborhood
BP	GO:0009110	vitamin biosynthetic process	IEP	Neighborhood
BP	GO:0009231	riboflavin biosynthetic process	IEP	Neighborhood
MF	GO:0010181	FMN binding	IEP	Neighborhood
BP	GO:0015711	organic anion transport	IEP	Neighborhood
BP	GO:0015740	C4-dicarboxylate transport	IEP	Neighborhood
BP	GO:0015743	malate transport	IEP	Neighborhood
BP	GO:0015849	organic acid transport	IEP	Neighborhood
BP	GO:0015936	coenzyme A metabolic process	IEP	Neighborhood
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Neighborhood
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Neighborhood
CC	GO:0030286	dynein complex	IEP	Neighborhood
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	Neighborhood
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	Neighborhood
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	Neighborhood
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	Neighborhood
BP	GO:0042726	flavin-containing compound metabolic process	IEP	Neighborhood
BP	GO:0042727	flavin-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0046942	carboxylic acid transport	IEP	Neighborhood
MF	GO:0050662	coenzyme binding	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000726	Glyco_hydro_19_cat	4	141

External Links

No external refs found!

Gb_20316

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation