Coexpression cluster: Cluster_57 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0034660 ncRNA metabolic process 3.89% (7/180) 3.34 6e-06 0.001125
GO:0006399 tRNA metabolic process 3.33% (6/180) 3.48 1.7e-05 0.001523
GO:0016070 RNA metabolic process 5.0% (9/180) 2.4 5.8e-05 0.003469
GO:0140101 catalytic activity, acting on a tRNA 2.78% (5/180) 3.42 0.000105 0.004708
GO:0004812 aminoacyl-tRNA ligase activity 2.22% (4/180) 3.67 0.00027 0.00539
GO:0016875 ligase activity, forming carbon-oxygen bonds 2.22% (4/180) 3.67 0.00027 0.00539
GO:0043038 amino acid activation 2.22% (4/180) 3.71 0.000246 0.006322
GO:0043039 tRNA aminoacylation 2.22% (4/180) 3.71 0.000246 0.006322
GO:0006418 tRNA aminoacylation for protein translation 2.22% (4/180) 3.82 0.000184 0.006615
GO:0003723 RNA binding 3.33% (6/180) 2.67 0.000373 0.006723
GO:0140098 catalytic activity, acting on RNA 3.33% (6/180) 2.62 0.000457 0.007485
GO:0008135 translation factor activity, RNA binding 1.67% (3/180) 4.04 0.000778 0.009999
GO:0003746 translation elongation factor activity 1.11% (2/180) 5.52 0.000777 0.010758
GO:0006414 translational elongation 1.11% (2/180) 5.52 0.000777 0.010758
GO:0090304 nucleic acid metabolic process 5.56% (10/180) 1.57 0.002125 0.025497
GO:0016874 ligase activity 2.22% (4/180) 2.53 0.005186 0.049133
GO:0008168 methyltransferase activity 2.22% (4/180) 2.53 0.005186 0.049133
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_17 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_135 0.022 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_1 0.032 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_10 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_11 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_12 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_13 0.03 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_17 0.029 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_19 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_23 0.031 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_26 0.027 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_29 0.031 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_32 0.03 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_33 0.033 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_35 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_37 0.051 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_39 0.026 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_40 0.026 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_41 0.024 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_42 0.021 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_49 0.037 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_52 0.028 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_55 0.031 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_72 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_74 0.031 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_76 0.024 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_90 0.026 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_92 0.026 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_102 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_109 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_111 0.024 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_112 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_115 0.026 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_118 0.024 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_124 0.03 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_134 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_135 0.029 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_137 0.03 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_138 0.024 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_143 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_145 0.026 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_150 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_151 0.028 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_157 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_166 0.026 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_171 0.03 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_174 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_177 0.033 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_181 0.036 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_186 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_190 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_193 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_194 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_196 0.035 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_201 0.03 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_202 0.038 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_210 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_155 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_19 0.029 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_253 0.022 Archaeplastida Compare
Sequences (180) (download table)

InterPro Domains

GO Terms

Family Terms