Coexpression cluster: Cluster_338 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005730 nucleolus 3.7% (2/54) 7.58 4.7e-05 0.009999
GO:0006364 rRNA processing 3.7% (2/54) 6.19 0.000347 0.012364
GO:0016072 rRNA metabolic process 3.7% (2/54) 6.19 0.000347 0.012364
GO:0006396 RNA processing 5.56% (3/54) 4.23 0.000558 0.014939
GO:1901615 organic hydroxy compound metabolic process 3.7% (2/54) 5.94 0.000494 0.015089
GO:0019751 polyol metabolic process 3.7% (2/54) 6.26 0.000314 0.016793
GO:0006066 alcohol metabolic process 3.7% (2/54) 6.26 0.000314 0.016793
GO:0016070 RNA metabolic process 7.41% (4/54) 3.28 0.000768 0.018259
GO:0034660 ncRNA metabolic process 5.56% (3/54) 4.74 0.0002 0.021412
GO:0090730 Las1 complex 1.85% (1/54) 9.58 0.001307 0.025431
GO:0000009 alpha-1,6-mannosyltransferase activity 1.85% (1/54) 9.58 0.001307 0.025431
GO:1905354 exoribonuclease complex 1.85% (1/54) 8.58 0.002613 0.027957
GO:0004379 glycylpeptide N-tetradecanoyltransferase activity 1.85% (1/54) 8.58 0.002613 0.027957
GO:0044445 cytosolic part 1.85% (1/54) 8.58 0.002613 0.027957
GO:0019107 myristoyltransferase activity 1.85% (1/54) 8.58 0.002613 0.027957
GO:0004000 adenosine deaminase activity 1.85% (1/54) 8.58 0.002613 0.027957
GO:1905348 endonuclease complex 1.85% (1/54) 8.58 0.002613 0.027957
GO:1902555 endoribonuclease complex 1.85% (1/54) 8.58 0.002613 0.027957
GO:0004376 glycolipid mannosyltransferase activity 1.85% (1/54) 8.58 0.002613 0.027957
GO:0034470 ncRNA processing 3.7% (2/54) 5.09 0.001602 0.028563
GO:1902911 protein kinase complex 1.85% (1/54) 7.58 0.005219 0.038511
GO:0004371 glycerone kinase activity 1.85% (1/54) 7.58 0.005219 0.038511
GO:0030688 preribosome, small subunit precursor 1.85% (1/54) 7.58 0.005219 0.038511
GO:0006071 glycerol metabolic process 1.85% (1/54) 7.58 0.005219 0.038511
GO:0000030 mannosyltransferase activity 1.85% (1/54) 7.58 0.005219 0.038511
GO:0019400 alditol metabolic process 1.85% (1/54) 7.58 0.005219 0.038511
GO:0046483 heterocycle metabolic process 9.26% (5/54) 2.13 0.005581 0.039808
GO:0006725 cellular aromatic compound metabolic process 9.26% (5/54) 2.11 0.006046 0.040433
GO:1901360 organic cyclic compound metabolic process 9.26% (5/54) 2.07 0.006688 0.040895
GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 1.85% (1/54) 7.26 0.006519 0.041034
GO:0006139 nucleobase-containing compound metabolic process 9.26% (5/54) 2.24 0.004055 0.041323
GO:0071704 organic substance metabolic process 20.37% (11/54) 1.23 0.00604 0.041698
GO:0044428 nuclear part 3.7% (2/54) 4.33 0.004493 0.041805
GO:0044238 primary metabolic process 20.37% (11/54) 1.29 0.004337 0.042187
GO:0016874 ligase activity 3.7% (2/54) 4.06 0.006512 0.042228
GO:0046855 inositol phosphate dephosphorylation 1.85% (1/54) 6.99 0.007818 0.044029
GO:0046838 phosphorylated carbohydrate dephosphorylation 1.85% (1/54) 6.99 0.007818 0.044029
GO:0071545 inositol phosphate catabolic process 1.85% (1/54) 6.99 0.007818 0.044029
GO:0090304 nucleic acid metabolic process 7.41% (4/54) 2.28 0.009181 0.047921
GO:0043647 inositol phosphate metabolic process 1.85% (1/54) 6.77 0.009115 0.048767
GO:0006807 nitrogen compound metabolic process 16.67% (9/54) 1.32 0.009073 0.049785
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_22 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_59 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_115 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_139 0.032 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_192 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_260 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_262 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_194 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_208 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_236 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_270 0.029 Archaeplastida Compare
Gingko biloba HCCA Cluster_241 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_7 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_65 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_195 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_279 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_353 0.022 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_142 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_153 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_167 0.033 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_176 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_208 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_263 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_93 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_435 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_49 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_254 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_316 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_341 0.027 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_195 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_260 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_214 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_220 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_232 0.024 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_60 0.026 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_121 0.023 Archaeplastida Compare
Sequences (54) (download table)

InterPro Domains

GO Terms

Family Terms