Coexpression cluster: Cluster_294 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0046040 IMP metabolic process 4.76% (3/63) 8.95 0.0 2e-06
GO:0006188 IMP biosynthetic process 4.76% (3/63) 8.95 0.0 2e-06
GO:0034641 cellular nitrogen compound metabolic process 17.46% (11/63) 2.79 0.0 3.6e-05
GO:1901566 organonitrogen compound biosynthetic process 12.7% (8/63) 3.27 2e-06 0.000103
GO:0006189 'de novo' IMP biosynthetic process 3.17% (2/63) 9.37 2e-06 0.000108
GO:0006725 cellular aromatic compound metabolic process 12.7% (8/63) 2.86 1.4e-05 0.00047
GO:1901360 organic cyclic compound metabolic process 12.7% (8/63) 2.82 1.7e-05 0.000504
GO:0046483 heterocycle metabolic process 12.7% (8/63) 2.87 1.3e-05 0.000527
GO:0006139 nucleobase-containing compound metabolic process 11.11% (7/63) 2.87 4.9e-05 0.001283
GO:0044281 small molecule metabolic process 9.52% (6/63) 3.15 6e-05 0.001292
GO:0044249 cellular biosynthetic process 12.7% (8/63) 2.58 5.6e-05 0.001328
GO:1901576 organic substance biosynthetic process 12.7% (8/63) 2.5 8.2e-05 0.001623
GO:0006807 nitrogen compound metabolic process 22.22% (14/63) 1.65 0.000104 0.001912
GO:0009123 nucleoside monophosphate metabolic process 4.76% (3/63) 4.63 0.000251 0.002386
GO:0009167 purine ribonucleoside monophosphate metabolic process 4.76% (3/63) 4.63 0.000251 0.002386
GO:0009161 ribonucleoside monophosphate metabolic process 4.76% (3/63) 4.63 0.000251 0.002386
GO:0009126 purine nucleoside monophosphate metabolic process 4.76% (3/63) 4.63 0.000251 0.002386
GO:0006164 purine nucleotide biosynthetic process 4.76% (3/63) 4.58 0.000279 0.002558
GO:0009058 biosynthetic process 12.7% (8/63) 2.37 0.000151 0.002565
GO:0044271 cellular nitrogen compound biosynthetic process 9.52% (6/63) 2.71 0.000309 0.002625
GO:0072522 purine-containing compound biosynthetic process 4.76% (3/63) 4.54 0.0003 0.002642
GO:0009152 purine ribonucleotide biosynthetic process 4.76% (3/63) 4.65 0.000242 0.002737
GO:0009260 ribonucleotide biosynthetic process 4.76% (3/63) 4.65 0.000242 0.002737
GO:0046390 ribose phosphate biosynthetic process 4.76% (3/63) 4.65 0.000242 0.002737
GO:0009156 ribonucleoside monophosphate biosynthetic process 4.76% (3/63) 4.72 0.000207 0.002739
GO:0009124 nucleoside monophosphate biosynthetic process 4.76% (3/63) 4.72 0.000207 0.002739
GO:0009127 purine nucleoside monophosphate biosynthetic process 4.76% (3/63) 4.72 0.000207 0.002739
GO:0009168 purine ribonucleoside monophosphate biosynthetic process 4.76% (3/63) 4.72 0.000207 0.002739
GO:0042393 histone binding 3.17% (2/63) 6.2 0.00034 0.002793
GO:0009150 purine ribonucleotide metabolic process 4.76% (3/63) 4.38 0.000416 0.00319
GO:0009259 ribonucleotide metabolic process 4.76% (3/63) 4.38 0.000416 0.00319
GO:1901293 nucleoside phosphate biosynthetic process 4.76% (3/63) 4.28 0.000512 0.003479
GO:0009165 nucleotide biosynthetic process 4.76% (3/63) 4.28 0.000512 0.003479
GO:0019693 ribose phosphate metabolic process 4.76% (3/63) 4.26 0.000526 0.00348
GO:0006163 purine nucleotide metabolic process 4.76% (3/63) 4.32 0.000469 0.003487
GO:0072521 purine-containing compound metabolic process 4.76% (3/63) 4.29 0.000497 0.003585
GO:1901137 carbohydrate derivative biosynthetic process 4.76% (3/63) 4.18 0.000621 0.003993
GO:0044237 cellular metabolic process 20.63% (13/63) 1.45 0.000751 0.004706
GO:0009117 nucleotide metabolic process 4.76% (3/63) 4.02 0.000861 0.005254
GO:0019438 aromatic compound biosynthetic process 6.35% (4/63) 3.23 0.000889 0.005292
GO:0018130 heterocycle biosynthetic process 6.35% (4/63) 3.22 0.000913 0.0053
GO:0006753 nucleoside phosphate metabolic process 4.76% (3/63) 3.97 0.000945 0.005355
GO:0055086 nucleobase-containing small molecule metabolic process 4.76% (3/63) 3.77 0.001416 0.007657
GO:1901362 organic cyclic compound biosynthetic process 6.35% (4/63) 3.06 0.001387 0.007675
GO:0006520 cellular amino acid metabolic process 4.76% (3/63) 3.72 0.00156 0.007734
GO:0090407 organophosphate biosynthetic process 4.76% (3/63) 3.73 0.00153 0.007749
GO:0004055 argininosuccinate synthase activity 1.59% (1/63) 9.37 0.001515 0.00784
GO:0004399 histidinol dehydrogenase activity 1.59% (1/63) 9.37 0.001515 0.00784
GO:1901607 alpha-amino acid biosynthetic process 3.17% (2/63) 4.94 0.00196 0.009522
GO:1901135 carbohydrate derivative metabolic process 4.76% (3/63) 3.52 0.002303 0.010962
GO:0044238 primary metabolic process 20.63% (13/63) 1.25 0.002527 0.011794
GO:0006526 arginine biosynthetic process 1.59% (1/63) 8.37 0.003028 0.013347
GO:0006525 arginine metabolic process 1.59% (1/63) 8.37 0.003028 0.013347
GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity 1.59% (1/63) 8.37 0.003028 0.013347
GO:0009987 cellular process 20.63% (13/63) 1.22 0.003203 0.013862
GO:0008652 cellular amino acid biosynthetic process 3.17% (2/63) 4.53 0.003418 0.014527
GO:0071704 organic substance metabolic process 20.63% (13/63) 1.19 0.003631 0.015161
GO:0019637 organophosphate metabolic process 4.76% (3/63) 3.24 0.003983 0.016345
GO:1901605 alpha-amino acid metabolic process 3.17% (2/63) 4.39 0.004158 0.016494
GO:1901564 organonitrogen compound metabolic process 15.87% (10/63) 1.4 0.004118 0.01661
GO:0034654 nucleobase-containing compound biosynthetic process 4.76% (3/63) 3.17 0.004595 0.017928
GO:0003725 double-stranded RNA binding 1.59% (1/63) 7.37 0.006048 0.022847
GO:0090304 nucleic acid metabolic process 6.35% (4/63) 2.47 0.005978 0.022949
GO:0008152 metabolic process 23.81% (15/63) 1.0 0.006261 0.023282
GO:0140101 catalytic activity, acting on a tRNA 3.17% (2/63) 4.03 0.006779 0.024821
GO:0006399 tRNA metabolic process 3.17% (2/63) 3.94 0.00761 0.025875
GO:0008137 NADH dehydrogenase (ubiquinone) activity 1.59% (1/63) 7.04 0.007554 0.026056
GO:0050136 NADH dehydrogenase (quinone) activity 1.59% (1/63) 7.04 0.007554 0.026056
GO:0016842 amidine-lyase activity 1.59% (1/63) 7.04 0.007554 0.026056
GO:0003954 NADH dehydrogenase activity 1.59% (1/63) 7.04 0.007554 0.026056
GO:0006547 histidine metabolic process 1.59% (1/63) 6.56 0.01056 0.031027
GO:0004045 aminoacyl-tRNA hydrolase activity 1.59% (1/63) 6.56 0.01056 0.031027
GO:0031124 mRNA 3'-end processing 1.59% (1/63) 6.56 0.01056 0.031027
GO:0052803 imidazole-containing compound metabolic process 1.59% (1/63) 6.56 0.01056 0.031027
GO:0009064 glutamine family amino acid metabolic process 1.59% (1/63) 6.56 0.01056 0.031027
GO:0009084 glutamine family amino acid biosynthetic process 1.59% (1/63) 6.56 0.01056 0.031027
GO:0000105 histidine biosynthetic process 1.59% (1/63) 6.56 0.01056 0.031027
GO:0006082 organic acid metabolic process 4.76% (3/63) 2.79 0.009527 0.031062
GO:0019752 carboxylic acid metabolic process 4.76% (3/63) 2.79 0.009438 0.031197
GO:0043436 oxoacid metabolic process 4.76% (3/63) 2.79 0.009438 0.031197
GO:0005840 ribosome 4.76% (3/63) 2.75 0.010262 0.033003
GO:0006412 translation 4.76% (3/63) 2.67 0.011827 0.034326
GO:0031123 RNA 3'-end processing 1.59% (1/63) 6.37 0.012059 0.03458
GO:0003735 structural constituent of ribosome 4.76% (3/63) 2.65 0.012342 0.03497
GO:0043043 peptide biosynthetic process 4.76% (3/63) 2.63 0.012764 0.035324
GO:0034660 ncRNA metabolic process 3.17% (2/63) 3.56 0.012621 0.035338
GO:0043232 intracellular non-membrane-bounded organelle 4.76% (3/63) 2.59 0.013632 0.03605
GO:0043228 non-membrane-bounded organelle 4.76% (3/63) 2.59 0.013632 0.03605
GO:0006518 peptide metabolic process 4.76% (3/63) 2.59 0.013632 0.03605
GO:0016874 ligase activity 3.17% (2/63) 3.52 0.01327 0.036303
GO:0043604 amide biosynthetic process 4.76% (3/63) 2.58 0.013966 0.036527
GO:1990904 ribonucleoprotein complex 4.76% (3/63) 2.56 0.014419 0.037301
GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor 1.59% (1/63) 6.04 0.015052 0.037708
GO:0043229 intracellular organelle 6.35% (4/63) 2.08 0.014982 0.037933
GO:0043226 organelle 6.35% (4/63) 2.08 0.014982 0.037933
GO:0005198 structural molecule activity 4.76% (3/63) 2.52 0.015468 0.037951
GO:0043603 cellular amide metabolic process 4.76% (3/63) 2.52 0.015468 0.037951
GO:0016070 RNA metabolic process 4.76% (3/63) 2.49 0.016435 0.039914
GO:0016840 carbon-nitrogen lyase activity 1.59% (1/63) 5.67 0.019523 0.046935
GO:0006396 RNA processing 3.17% (2/63) 3.19 0.020532 0.048867
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_91 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_109 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_122 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_164 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_166 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_183 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_213 0.027 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_171 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_263 0.028 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_44 0.028 Archaeplastida Compare
Gingko biloba HCCA Cluster_199 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_140 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_166 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_195 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_351 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_20 0.022 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_84 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_160 0.025 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_163 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_2 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_300 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_321 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_488 0.034 Archaeplastida Compare
Picea abies HCCA Cluster_498 0.027 Archaeplastida Compare
Picea abies HCCA Cluster_531 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_77 0.033 Archaeplastida Compare
Oryza sativa HCCA Cluster_114 0.045 Archaeplastida Compare
Oryza sativa HCCA Cluster_204 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_296 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_347 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_219 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_32 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_220 0.051 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_283 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_119 0.036 Archaeplastida Compare
Vitis vinifera HCCA Cluster_209 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_218 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_242 0.023 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_25 0.025 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_79 0.024 Archaeplastida Compare
Sequences (63) (download table)

InterPro Domains

GO Terms

Family Terms