Coexpression cluster: Cluster_172 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005488 binding 37.99% (87/229) 0.95 0.0 0.0
GO:0003674 molecular_function 52.4% (120/229) 0.67 0.0 0.0
GO:0003676 nucleic acid binding 13.97% (32/229) 1.65 0.0 2e-06
GO:0097159 organic cyclic compound binding 23.58% (54/229) 1.07 0.0 1.1e-05
GO:1901363 heterocyclic compound binding 23.58% (54/229) 1.07 0.0 1.3e-05
GO:0033554 cellular response to stress 3.49% (8/229) 3.65 0.0 1.5e-05
GO:0006974 cellular response to DNA damage stimulus 3.49% (8/229) 3.65 0.0 1.5e-05
GO:0051716 cellular response to stimulus 3.49% (8/229) 3.65 0.0 1.5e-05
GO:0006281 DNA repair 3.49% (8/229) 3.69 0.0 1.9e-05
GO:0044464 cell part 13.97% (32/229) 1.42 0.0 1.9e-05
GO:0009987 cellular process 22.27% (51/229) 1.05 0.0 2.1e-05
GO:0006725 cellular aromatic compound metabolic process 8.73% (20/229) 1.84 1e-06 2.6e-05
GO:0046483 heterocycle metabolic process 8.73% (20/229) 1.85 1e-06 2.7e-05
GO:0000166 nucleotide binding 14.85% (34/229) 1.32 1e-06 2.7e-05
GO:1901265 nucleoside phosphate binding 14.85% (34/229) 1.32 1e-06 2.7e-05
GO:0097367 carbohydrate derivative binding 13.97% (32/229) 1.37 1e-06 2.8e-05
GO:0032555 purine ribonucleotide binding 13.97% (32/229) 1.39 1e-06 2.9e-05
GO:0035639 purine ribonucleoside triphosphate binding 13.1% (30/229) 1.43 1e-06 3e-05
GO:0032553 ribonucleotide binding 13.97% (32/229) 1.38 1e-06 3e-05
GO:0017076 purine nucleotide binding 13.97% (32/229) 1.38 1e-06 3e-05
GO:0008144 drug binding 12.23% (28/229) 1.44 2e-06 3.8e-05
GO:0032559 adenyl ribonucleotide binding 12.66% (29/229) 1.42 1e-06 3.8e-05
GO:0030554 adenyl nucleotide binding 12.66% (29/229) 1.41 2e-06 3.9e-05
GO:1901360 organic cyclic compound metabolic process 8.73% (20/229) 1.8 1e-06 3.9e-05
GO:0005524 ATP binding 11.79% (27/229) 1.47 2e-06 4.2e-05
GO:0036094 small molecule binding 14.85% (34/229) 1.25 2e-06 5.2e-05
GO:0006139 nucleobase-containing compound metabolic process 7.86% (18/229) 1.87 3e-06 5.3e-05
GO:0043168 anion binding 14.41% (33/229) 1.24 4e-06 7.7e-05
GO:0006259 DNA metabolic process 3.93% (9/229) 2.87 4e-06 8.5e-05
GO:0090304 nucleic acid metabolic process 6.55% (15/229) 2.01 6e-06 0.000106
GO:0006298 mismatch repair 1.75% (4/229) 4.99 6e-06 0.00011
GO:0044424 intracellular part 11.35% (26/229) 1.38 8e-06 0.000145
GO:0005575 cellular_component 18.34% (42/229) 1.0 1.1e-05 0.000193
GO:0043167 ion binding 19.65% (45/229) 0.94 1.5e-05 0.000252
GO:0005515 protein binding 13.54% (31/229) 1.17 1.9e-05 0.000311
GO:0044238 primary metabolic process 19.65% (45/229) 0.92 2.1e-05 0.000327
GO:0004386 helicase activity 3.49% (8/229) 2.76 2.6e-05 0.000397
GO:0006074 (1->3)-beta-D-glucan metabolic process 1.31% (3/229) 5.48 3.2e-05 0.000431
GO:0006075 (1->3)-beta-D-glucan biosynthetic process 1.31% (3/229) 5.48 3.2e-05 0.000431
GO:0000148 1,3-beta-D-glucan synthase complex 1.31% (3/229) 5.48 3.2e-05 0.000431
GO:0003843 1,3-beta-D-glucan synthase activity 1.31% (3/229) 5.48 3.2e-05 0.000431
GO:0034641 cellular nitrogen compound metabolic process 8.73% (20/229) 1.42 7e-05 0.000935
GO:0008150 biological_process 34.5% (79/229) 0.56 8.1e-05 0.001051
GO:0071704 organic substance metabolic process 19.65% (45/229) 0.83 8.9e-05 0.001131
GO:0070035 purine NTP-dependent helicase activity 2.62% (6/229) 3.02 9.9e-05 0.001208
GO:0008026 ATP-dependent helicase activity 2.62% (6/229) 3.02 9.9e-05 0.001208
GO:0017111 nucleoside-triphosphatase activity 5.24% (12/229) 1.88 0.000117 0.00139
GO:0043170 macromolecule metabolic process 14.41% (33/229) 0.98 0.000136 0.001546
GO:0044237 cellular metabolic process 16.16% (37/229) 0.92 0.000133 0.00155
GO:0016462 pyrophosphatase activity 5.24% (12/229) 1.85 0.000145 0.001617
GO:0016817 hydrolase activity, acting on acid anhydrides 5.24% (12/229) 1.81 0.000182 0.001956
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 5.24% (12/229) 1.81 0.000182 0.001956
GO:0044459 plasma membrane part 1.31% (3/229) 4.68 0.000198 0.001974
GO:0030983 mismatched DNA binding 1.31% (3/229) 4.68 0.000198 0.001974
GO:0003690 double-stranded DNA binding 1.31% (3/229) 4.68 0.000198 0.001974
GO:0098797 plasma membrane protein complex 1.31% (3/229) 4.68 0.000198 0.001974
GO:0006807 nitrogen compound metabolic process 15.28% (35/229) 0.9 0.000268 0.002627
GO:0042623 ATPase activity, coupled 3.06% (7/229) 2.44 0.000332 0.003204
GO:0003824 catalytic activity 27.95% (64/229) 0.58 0.000369 0.003497
GO:0044422 organelle part 3.93% (9/229) 1.9 0.000771 0.007062
GO:0044446 intracellular organelle part 3.93% (9/229) 1.9 0.000771 0.007062
GO:0016740 transferase activity 12.23% (28/229) 0.92 0.000871 0.007852
GO:0005634 nucleus 3.93% (9/229) 1.85 0.000957 0.008489
GO:0000922 spindle pole 0.87% (2/229) 5.31 0.001027 0.008831
GO:0005815 microtubule organizing center 0.87% (2/229) 5.31 0.001027 0.008831
GO:0006950 response to stress 3.49% (8/229) 1.97 0.001077 0.009121
GO:0044260 cellular macromolecule metabolic process 10.48% (24/229) 0.99 0.001101 0.00919
GO:0050896 response to stimulus 3.49% (8/229) 1.86 0.001734 0.014251
GO:0016772 transferase activity, transferring phosphorus-containing groups 7.42% (17/229) 1.14 0.002029 0.016441
GO:0008194 UDP-glycosyltransferase activity 1.75% (4/229) 2.88 0.002184 0.017442
GO:0035251 UDP-glucosyltransferase activity 1.31% (3/229) 3.48 0.002411 0.018984
GO:0051273 beta-glucan metabolic process 1.31% (3/229) 3.4 0.002873 0.021706
GO:0051274 beta-glucan biosynthetic process 1.31% (3/229) 3.4 0.002873 0.021706
GO:0009250 glucan biosynthetic process 1.31% (3/229) 3.4 0.002873 0.021706
GO:0016887 ATPase activity 3.06% (7/229) 1.9 0.002928 0.021823
GO:0043231 intracellular membrane-bounded organelle 3.93% (9/229) 1.6 0.003212 0.023626
GO:0043227 membrane-bounded organelle 3.93% (9/229) 1.59 0.003272 0.023754
GO:0008152 metabolic process 23.58% (54/229) 0.51 0.00389 0.027881
GO:1990234 transferase complex 1.75% (4/229) 2.63 0.004038 0.028574
GO:0016051 carbohydrate biosynthetic process 1.75% (4/229) 2.61 0.004229 0.02955
GO:0000271 polysaccharide biosynthetic process 1.31% (3/229) 3.16 0.004573 0.031172
GO:0033692 cellular polysaccharide biosynthetic process 1.31% (3/229) 3.16 0.004573 0.031172
GO:0000226 microtubule cytoskeleton organization 0.87% (2/229) 4.2 0.005137 0.034596
GO:0005737 cytoplasm 2.18% (5/229) 2.16 0.005352 0.034786
GO:0060089 molecular transducer activity 1.31% (3/229) 3.09 0.005248 0.034926
GO:0016043 cellular component organization 2.62% (6/229) 1.92 0.005337 0.035097
GO:0008270 zinc ion binding 4.8% (11/229) 1.29 0.005993 0.038508
GO:0006184 obsolete GTP catabolic process 0.87% (2/229) 3.99 0.006839 0.043443
GO:0048280 vesicle fusion with Golgi apparatus 0.44% (1/229) 6.9 0.008384 0.044215
GO:0004640 phosphoribosylanthranilate isomerase activity 0.44% (1/229) 6.9 0.008384 0.044215
GO:0006906 vesicle fusion 0.44% (1/229) 6.9 0.008384 0.044215
GO:0061025 membrane fusion 0.44% (1/229) 6.9 0.008384 0.044215
GO:0090174 organelle membrane fusion 0.44% (1/229) 6.9 0.008384 0.044215
GO:0051090 regulation of DNA-binding transcription factor activity 0.44% (1/229) 6.9 0.008384 0.044215
GO:0016649 oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor 0.44% (1/229) 6.9 0.008384 0.044215
GO:0048284 organelle fusion 0.44% (1/229) 6.9 0.008384 0.044215
GO:0045116 protein neddylation 0.44% (1/229) 6.9 0.008384 0.044215
GO:0008158 hedgehog receptor activity 0.44% (1/229) 6.9 0.008384 0.044215
GO:0004198 calcium-dependent cysteine-type endopeptidase activity 0.44% (1/229) 6.9 0.008384 0.044215
GO:0016050 vesicle organization 0.44% (1/229) 6.9 0.008384 0.044215
GO:0004399 histidinol dehydrogenase activity 0.44% (1/229) 6.9 0.008384 0.044215
GO:0004174 electron-transferring-flavoprotein dehydrogenase activity 0.44% (1/229) 6.9 0.008384 0.044215
GO:0006996 organelle organization 1.31% (3/229) 2.93 0.00719 0.045157
GO:0016787 hydrolase activity 10.04% (23/229) 0.79 0.007808 0.047444
GO:0071840 cellular component organization or biogenesis 2.62% (6/229) 1.81 0.007661 0.047586
GO:0016592 mediator complex 0.87% (2/229) 3.9 0.007773 0.047749
GO:0034637 cellular carbohydrate biosynthetic process 1.31% (3/229) 2.78 0.009504 0.049652
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_1 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_11 0.063 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_17 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_22 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_24 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_76 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_114 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_139 0.036 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_145 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_152 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_163 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_192 0.043 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_193 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_221 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_240 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_74 0.028 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_190 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_213 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_103 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_145 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_41 0.043 Archaeplastida Compare
Gingko biloba HCCA Cluster_79 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_155 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_175 0.025 Archaeplastida Compare
Gingko biloba HCCA Cluster_256 0.027 Archaeplastida Compare
Gingko biloba HCCA Cluster_262 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_289 0.033 Archaeplastida Compare
Gingko biloba HCCA Cluster_318 0.025 Archaeplastida Compare
Gingko biloba HCCA Cluster_324 0.04 Archaeplastida Compare
Zea mays HCCA Cluster_30 0.036 Archaeplastida Compare
Zea mays HCCA Cluster_61 0.051 Archaeplastida Compare
Zea mays HCCA Cluster_103 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_136 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_145 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_216 0.048 Archaeplastida Compare
Zea mays HCCA Cluster_232 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_250 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_258 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_267 0.031 Archaeplastida Compare
Zea mays HCCA Cluster_276 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_290 0.034 Archaeplastida Compare
Zea mays HCCA Cluster_310 0.042 Archaeplastida Compare
Zea mays HCCA Cluster_313 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_326 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_339 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_341 0.031 Archaeplastida Compare
Zea mays HCCA Cluster_352 0.053 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_19 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_22 0.035 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_68 0.07 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_72 0.025 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_132 0.038 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_153 0.032 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_158 0.029 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_176 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_8 0.035 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_55 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_111 0.035 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_126 0.038 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_146 0.031 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_149 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_154 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_169 0.062 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_186 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_203 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_237 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_272 0.028 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_286 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_293 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_32 0.045 Archaeplastida Compare
Picea abies HCCA Cluster_35 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_64 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_210 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_220 0.035 Archaeplastida Compare
Picea abies HCCA Cluster_256 0.049 Archaeplastida Compare
Picea abies HCCA Cluster_261 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_380 0.043 Archaeplastida Compare
Picea abies HCCA Cluster_382 0.028 Archaeplastida Compare
Picea abies HCCA Cluster_393 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_403 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_412 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_420 0.033 Archaeplastida Compare
Picea abies HCCA Cluster_437 0.035 Archaeplastida Compare
Picea abies HCCA Cluster_479 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_485 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_491 0.037 Archaeplastida Compare
Picea abies HCCA Cluster_516 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_519 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_523 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_536 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_40 0.064 Archaeplastida Compare
Oryza sativa HCCA Cluster_42 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_72 0.05 Archaeplastida Compare
Oryza sativa HCCA Cluster_94 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_112 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_141 0.07 Archaeplastida Compare
Oryza sativa HCCA Cluster_168 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_176 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_191 0.034 Archaeplastida Compare
Oryza sativa HCCA Cluster_215 0.034 Archaeplastida Compare
Oryza sativa HCCA Cluster_219 0.069 Archaeplastida Compare
Oryza sativa HCCA Cluster_346 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_66 0.03 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_75 0.05 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_84 0.042 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_95 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_125 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_141 0.043 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_181 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_201 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_219 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_35 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_105 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_118 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_127 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_131 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_140 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_173 0.052 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_182 0.084 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_202 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_215 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_217 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_226 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_229 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_233 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_243 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_252 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_260 0.056 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_263 0.037 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_277 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_54 0.031 Archaeplastida Compare
Vitis vinifera HCCA Cluster_56 0.037 Archaeplastida Compare
Vitis vinifera HCCA Cluster_60 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_84 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_106 0.085 Archaeplastida Compare
Vitis vinifera HCCA Cluster_123 0.053 Archaeplastida Compare
Vitis vinifera HCCA Cluster_167 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_181 0.039 Archaeplastida Compare
Vitis vinifera HCCA Cluster_211 0.035 Archaeplastida Compare
Vitis vinifera HCCA Cluster_218 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_220 0.031 Archaeplastida Compare
Vitis vinifera HCCA Cluster_221 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_222 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_233 0.029 Archaeplastida Compare
Vitis vinifera HCCA Cluster_236 0.023 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_48 0.029 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_60 0.023 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_62 0.025 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_81 0.022 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_95 0.041 Archaeplastida Compare
Sequences (229) (download table)

InterPro Domains

GO Terms

Family Terms