AT2G44350 (CSY4, ATCS)


Aliases : CSY4, ATCS

Description : Citrate synthase family protein


Gene families : OG0002366 (Archaeplastida) Phylogenetic Tree(s): OG0002366_tree ,
OG_05_0002736 (LandPlants) Phylogenetic Tree(s): OG_05_0002736_tree ,
OG_06_0003553 (SeedPlants) Phylogenetic Tree(s): OG_06_0003553_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G44350
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00238170 evm_27.TU.AmTr_v1... Cellular respiration.tricarboxylic acid cycle.citrate synthase 0.03 Archaeplastida
Cpa|evm.model.tig00020556.34 No alias Citrate synthase, mitochondrial OS=Daucus carota 0.02 Archaeplastida
Cpa|evm.model.tig00021127.109 No alias Citrate synthase, mitochondrial OS=Daucus carota 0.02 Archaeplastida
Cpa|evm.model.tig00021127.110 No alias Cellular respiration.tricarboxylic acid cycle.citrate synthase 0.02 Archaeplastida
Cre12.g514750 No alias Cellular respiration.tricarboxylic acid cycle.citrate synthase 0.1 Archaeplastida
GSVIVT01001358001 No alias Cellular respiration.tricarboxylic acid cycle.citrate synthase 0.06 Archaeplastida
LOC_Os02g10070.2 No alias citrate synthase 0.03 Archaeplastida
LOC_Os11g33240.1 No alias citrate synthase 0.08 Archaeplastida
Mp8g09100.1 No alias citrate synthase 0.07 Archaeplastida
Pp3c13_21410V3.1 No alias Citrate synthase family protein 0.03 Archaeplastida
Solyc01g073740.4.1 No alias citrate synthase 0.06 Archaeplastida
Zm00001e025041_P001 No alias citrate synthase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004108 citrate (Si)-synthase activity IDA Interproscan
MF GO:0004108 citrate (Si)-synthase activity ISS Interproscan
MF GO:0005524 ATP binding IDA Interproscan
CC GO:0005618 cell wall IDA Interproscan
CC GO:0005739 mitochondrion IDA Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
CC GO:0005739 mitochondrion TAS Interproscan
BP GO:0006096 glycolytic process RCA Interproscan
BP GO:0006099 tricarboxylic acid cycle ISS Interproscan
BP GO:0006099 tricarboxylic acid cycle TAS Interproscan
MF GO:0008270 zinc ion binding IDA Interproscan
BP GO:0009060 aerobic respiration RCA Interproscan
CC GO:0009507 chloroplast IDA Interproscan
BP GO:0046686 response to cadmium ion IEP Interproscan
BP GO:0046686 response to cadmium ion RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
BP GO:0000060 protein import into nucleus, translocation IEP Neighborhood
MF GO:0000104 succinate dehydrogenase activity IEP Neighborhood
CC GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) IEP Neighborhood
BP GO:0002376 immune system process IEP Neighborhood
MF GO:0003872 6-phosphofructokinase activity IEP Neighborhood
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
MF GO:0003973 (S)-2-hydroxy-acid oxidase activity IEP Neighborhood
MF GO:0004148 dihydrolipoyl dehydrogenase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Neighborhood
MF GO:0004365 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity IEP Neighborhood
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Neighborhood
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Neighborhood
MF GO:0004618 phosphoglycerate kinase activity IEP Neighborhood
MF GO:0004619 phosphoglycerate mutase activity IEP Neighborhood
MF GO:0004634 phosphopyruvate hydratase activity IEP Neighborhood
MF GO:0004738 pyruvate dehydrogenase activity IEP Neighborhood
MF GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity IEP Neighborhood
MF GO:0004742 dihydrolipoyllysine-residue acetyltransferase activity IEP Neighborhood
MF GO:0004743 pyruvate kinase activity IEP Neighborhood
MF GO:0004774 succinate-CoA ligase activity IEP Neighborhood
MF GO:0004776 succinate-CoA ligase (GDP-forming) activity IEP Neighborhood
MF GO:0004801 sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005740 mitochondrial envelope IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005746 mitochondrial respiratory chain IEP Neighborhood
CC GO:0005747 mitochondrial respiratory chain complex I IEP Neighborhood
CC GO:0005750 mitochondrial respiratory chain complex III IEP Neighborhood
CC GO:0005753 mitochondrial proton-transporting ATP synthase complex IEP Neighborhood
CC GO:0005758 mitochondrial intermembrane space IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
CC GO:0005774 vacuolar membrane IEP Neighborhood
CC GO:0005829 cytosol IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
CC GO:0005911 cell-cell junction IEP Neighborhood
CC GO:0005945 6-phosphofructokinase complex IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0005986 sucrose biosynthetic process IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006007 glucose catabolic process IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0006085 acetyl-CoA biosynthetic process IEP Neighborhood
BP GO:0006094 gluconeogenesis IEP Neighborhood
BP GO:0006098 pentose-phosphate shunt IEP Neighborhood
BP GO:0006121 mitochondrial electron transport, succinate to ubiquinone IEP Neighborhood
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006739 NADP metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006833 water transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006970 response to osmotic stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007030 Golgi organization IEP Neighborhood
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008443 phosphofructokinase activity IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
MF GO:0008886 glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity IEP Neighborhood
MF GO:0008891 glycolate oxidase activity IEP Neighborhood
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Neighborhood
BP GO:0009051 pentose-phosphate shunt, oxidative branch IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009310 amine catabolic process IEP Neighborhood
CC GO:0009506 plasmodesma IEP Neighborhood
CC GO:0009532 plastid stroma IEP Neighborhood
CC GO:0009570 chloroplast stroma IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009627 systemic acquired resistance IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009651 response to salt stress IEP Neighborhood
BP GO:0009698 phenylpropanoid metabolic process IEP Neighborhood
BP GO:0009699 phenylpropanoid biosynthetic process IEP Neighborhood
BP GO:0009735 response to cytokinin IEP Neighborhood
BP GO:0009743 response to carbohydrate IEP Neighborhood
BP GO:0009744 response to sucrose IEP Neighborhood
BP GO:0009746 response to hexose IEP Neighborhood
BP GO:0009749 response to glucose IEP Neighborhood
BP GO:0009750 response to fructose IEP Neighborhood
BP GO:0009814 defense response, incompatible interaction IEP Neighborhood
BP GO:0009853 photorespiration IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010154 fruit development IEP Neighborhood
BP GO:0010204 defense response signaling pathway, resistance gene-independent IEP Neighborhood
BP GO:0010498 proteasomal protein catabolic process IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
BP GO:0016093 polyprenol metabolic process IEP Neighborhood
BP GO:0016094 polyprenol biosynthetic process IEP Neighborhood
MF GO:0016417 S-acyltransferase activity IEP Neighborhood
MF GO:0016418 S-acetyltransferase activity IEP Neighborhood
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016681 oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor IEP Neighborhood
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Neighborhood
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0018126 protein hydroxylation IEP Neighborhood
BP GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEP Neighborhood
MF GO:0019200 carbohydrate kinase activity IEP Neighborhood
MF GO:0019203 carbohydrate phosphatase activity IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
BP GO:0019319 hexose biosynthetic process IEP Neighborhood
BP GO:0019320 hexose catabolic process IEP Neighborhood
BP GO:0019348 dolichol metabolic process IEP Neighborhood
BP GO:0019408 dolichol biosynthetic process IEP Neighborhood
BP GO:0019471 4-hydroxyproline metabolic process IEP Neighborhood
BP GO:0019511 peptidyl-proline hydroxylation IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0019632 shikimate metabolic process IEP Neighborhood
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Neighborhood
BP GO:0019722 calcium-mediated signaling IEP Neighborhood
BP GO:0019748 secondary metabolic process IEP Neighborhood
BP GO:0019932 second-messenger-mediated signaling IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0022904 respiratory electron transport chain IEP Neighborhood
CC GO:0030054 cell junction IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
MF GO:0030523 dihydrolipoamide S-acyltransferase activity IEP Neighborhood
CC GO:0030964 NADH dehydrogenase complex IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031967 organelle envelope IEP Neighborhood
CC GO:0031970 organelle envelope lumen IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
CC GO:0031975 envelope IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0033587 shikimate biosynthetic process IEP Neighborhood
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0034284 response to monosaccharide IEP Neighborhood
BP GO:0034285 response to disaccharide IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034976 response to endoplasmic reticulum stress IEP Neighborhood
BP GO:0035384 thioester biosynthetic process IEP Neighborhood
BP GO:0035966 response to topologically incorrect protein IEP Neighborhood
BP GO:0042044 fluid transport IEP Neighborhood
BP GO:0042402 cellular biogenic amine catabolic process IEP Neighborhood
BP GO:0042743 hydrogen peroxide metabolic process IEP Neighborhood
BP GO:0043094 cellular metabolic compound salvage IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
MF GO:0043891 glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044437 vacuolar part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
MF GO:0045153 electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity IEP Neighborhood
CC GO:0045259 proton-transporting ATP synthase complex IEP Neighborhood
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Neighborhood
CC GO:0045271 respiratory chain complex I IEP Neighborhood
CC GO:0045275 respiratory chain complex III IEP Neighborhood
CC GO:0045281 succinate dehydrogenase complex IEP Neighborhood
BP GO:0046165 alcohol biosynthetic process IEP Neighborhood
BP GO:0046364 monosaccharide biosynthetic process IEP Neighborhood
BP GO:0046365 monosaccharide catabolic process IEP Neighborhood
MF GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity IEP Neighborhood
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0048468 cell development IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
MF GO:0050307 sucrose-phosphate phosphatase activity IEP Neighborhood
MF GO:0050308 sugar-phosphatase activity IEP Neighborhood
BP GO:0050665 hydrogen peroxide biosynthetic process IEP Neighborhood
MF GO:0050897 cobalt ion binding IEP Neighborhood
BP GO:0051156 glucose 6-phosphate metabolic process IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0051775 response to redox state IEP Neighborhood
BP GO:0051788 response to misfolded protein IEP Neighborhood
BP GO:0052541 plant-type cell wall cellulose metabolic process IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
CC GO:0070069 cytochrome complex IEP Neighborhood
CC GO:0070469 respiratory chain IEP Neighborhood
BP GO:0071616 acyl-CoA biosynthetic process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
MF GO:0080118 brassinosteroid sulfotransferase activity IEP Neighborhood
BP GO:0080129 proteasome core complex assembly IEP Neighborhood
BP GO:0080147 root hair cell development IEP Neighborhood
BP GO:0098542 defense response to other organism IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
CC GO:0098803 respiratory chain complex IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
BP GO:1903409 reactive oxygen species biosynthetic process IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002020 Citrate_synthase 78 456
No external refs found!