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Gb_35918


Description : transcription factor (CAMTA)


Gene families : OG0000551 (Archaeplastida) Phylogenetic Tree(s): OG0000551_tree ,
OG_05_0000809 (LandPlants) Phylogenetic Tree(s): OG_05_0000809_tree ,
OG_06_0001322 (SeedPlants) Phylogenetic Tree(s): OG_06_0001322_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_35918
Cluster HCCA: Cluster_338

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00052450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.CAMTA... 0.02 Archaeplastida
AMTR_s00057p00042800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.CAMTA... 0.02 Archaeplastida
AT5G64220 No alias Calmodulin-binding transcription activator protein with... 0.03 Archaeplastida
MA_10434871g0010 No alias transcription factor (CAMTA) 0.03 Archaeplastida
MA_10437014g0010 No alias Calmodulin-binding transcription activator 2... 0.06 Archaeplastida
MA_46443g0010 No alias transcription factor (CAMTA) 0.05 Archaeplastida
MA_959704g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
Mp7g03150.1 No alias transcription factor (CAMTA) 0.02 Archaeplastida
Smo441667 No alias RNA biosynthesis.transcriptional activation.CAMTA... 0.03 Archaeplastida
Zm00001e002794_P002 No alias transcription factor (CAMTA) 0.04 Archaeplastida
Zm00001e012888_P005 No alias transcription factor (CAMTA) 0.03 Archaeplastida
Zm00001e033909_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e035004_P001 No alias transcription factor (CAMTA) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
BP GO:0002097 tRNA wobble base modification IEP Neighborhood
BP GO:0002098 tRNA wobble uridine modification IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0005049 nuclear export signal receptor activity IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006354 DNA-templated transcription, elongation IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
CC GO:0008023 transcription elongation factor complex IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
CC GO:0016593 Cdc73/Paf1 complex IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0033588 Elongator holoenzyme complex IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
MF GO:0140142 nucleocytoplasmic carrier activity IEP Neighborhood
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 793 873
IPR005559 CG-1_dom 22 134
IPR000048 IQ_motif_EF-hand-BS 1050 1068
IPR000048 IQ_motif_EF-hand-BS 1026 1044
No external refs found!