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  5. Zm00001e002340_P001

Zm00001e002340_P001


Description : GBF-type ARF-GTPase guanyl-nucleotide exchange factor


Gene families : OG0001803 (Archaeplastida) Phylogenetic Tree(s): OG0001803_tree ,
OG_05_0001888 (LandPlants) Phylogenetic Tree(s): OG_05_0001888_tree ,
OG_06_0001526 (SeedPlants) Phylogenetic Tree(s): OG_06_0001526_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e002340_P001
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00269600 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 Archaeplastida
AT5G39500 GNL1, ERMO1 GNOM-like 1 0.1 Archaeplastida
Cre07.g334100 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.05 Archaeplastida
GSVIVT01013109001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 Archaeplastida
Gb_01979 No alias GBF-type ARF-GTPase guanyl-nucleotide exchange factor 0.03 Archaeplastida
Gb_26378 No alias GBF-type ARF-GTPase guanyl-nucleotide exchange factor 0.04 Archaeplastida
LOC_Os02g22090.1 No alias GBF-type ARF-GTPase guanyl-nucleotide exchange factor 0.11 Archaeplastida
MA_10434215g0010 No alias GBF-type ARF-GTPase guanyl-nucleotide exchange factor 0.04 Archaeplastida
MA_50146g0010 No alias GBF-type ARF-GTPase guanyl-nucleotide exchange factor 0.09 Archaeplastida
Mp3g25100.1 No alias GBF-type ARF-GTPase guanyl-nucleotide exchange factor 0.04 Archaeplastida
Pp3c15_11320V3.1 No alias sec7 domain-containing protein 0.04 Archaeplastida
Pp3c22_6150V3.1 No alias sec7 domain-containing protein 0.02 Archaeplastida
Smo101122 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 Archaeplastida
Solyc05g013040.3.1 No alias GBF-type ARF-GTPase guanyl-nucleotide exchange factor 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEA Interproscan
BP GO:0032012 regulation of ARF protein signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030126 COPI vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0061608 nuclear import signal receptor activity IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
MF GO:0140142 nucleocytoplasmic carrier activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000904 Sec7_dom 543 726
IPR032691 Sec7_N 296 457
No external refs found!