AT4G25960 (PGP2)

Aliases : PGP2

Description : P-glycoprotein 2

Gene families : OG0000057 (Archaeplastida) Phylogenetic Tree(s): OG0000057_tree ,
OG_05_0000448 (LandPlants) Phylogenetic Tree(s): OG_05_0000448_tree ,
OG_06_0009042 (SeedPlants) Phylogenetic Tree(s): OG_06_0009042_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G25960
Cluster	HCCA: Cluster_129

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00254310	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
AMTR_s00045p00108620	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.06	Archaeplastida
AMTR_s00045p00109940	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
AMTR_s00048p00046670	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
AMTR_s00055p00102180	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.08	Archaeplastida
AMTR_s00056p00132920	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
AMTR_s00090p00165440	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
AT1G27940	PGP13	P-glycoprotein 13	0.05	Archaeplastida
AT1G28010	ABCB14, ATABCB14, PGP14	P-glycoprotein 14	0.07	Archaeplastida
AT3G28345	No alias	ABC transporter family protein	0.06	Archaeplastida
AT3G28360	PGP16	P-glycoprotein 16	0.04	Archaeplastida
AT3G62150	PGP21	P-glycoprotein 21	0.06	Archaeplastida
AT4G01830	PGP5	P-glycoprotein 5	0.04	Archaeplastida
GSVIVT01009946001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01013125001	No alias	Solute transport.primary active transport.ABC...	0.07	Archaeplastida
GSVIVT01021365001	No alias	Solute transport.primary active transport.ABC...	0.07	Archaeplastida
GSVIVT01028256001	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
GSVIVT01032578001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Gb_02468	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Gb_06993	No alias	serine carboxypeptidase. subfamily ABCB transporter	0.03	Archaeplastida
Gb_07563	No alias	subfamily ABCB transporter	0.06	Archaeplastida
Gb_08706	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Gb_10211	No alias	subfamily ABCB transporter	0.05	Archaeplastida
Gb_10215	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Gb_10216	No alias	subfamily ABCB transporter	0.04	Archaeplastida
Gb_13906	No alias	subfamily ABCB transporter	0.08	Archaeplastida
Gb_13908	No alias	ABC transporter B family member 10 OS=Arabidopsis...	0.05	Archaeplastida
Gb_27347	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Gb_32125	No alias	subfamily ABCB transporter	0.07	Archaeplastida
Gb_33057	No alias	subfamily ABCB transporter	0.07	Archaeplastida
Gb_33058	No alias	subfamily ABCB transporter	0.07	Archaeplastida
Gb_36497	No alias	subfamily ABCB transporter	0.05	Archaeplastida
Gb_36503	No alias	serine carboxypeptidase. subfamily ABCB transporter	0.02	Archaeplastida
Gb_38960	No alias	subfamily ABCB transporter	0.02	Archaeplastida
LOC_Os01g18670.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
LOC_Os01g35030.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
LOC_Os01g50080.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
LOC_Os01g50160.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
LOC_Os02g46680.1	No alias	subfamily ABCB transporter	0.12	Archaeplastida
LOC_Os04g38570.1	No alias	auxin efflux transporter (ABCB19)	0.03	Archaeplastida
LOC_Os05g47500.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
LOC_Os08g45030.1	No alias	subfamily ABCB transporter	0.05	Archaeplastida
MA_10432922g0010	No alias	subfamily ABCB transporter	0.06	Archaeplastida
MA_126766g0010	No alias	subfamily ABCB transporter	0.08	Archaeplastida
MA_18863g0010	No alias	subfamily ABCB transporter	0.03	Archaeplastida
MA_79399g0010	No alias	Putative multidrug resistance protein OS=Oryza sativa...	0.03	Archaeplastida
MA_934204g0010	No alias	subfamily ABCB transporter	0.08	Archaeplastida
Mp2g02920.1	No alias	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.03	Archaeplastida
Mp2g11920.1	No alias	subfamily ABCB transporter	0.04	Archaeplastida
Mp7g04390.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Pp3c1_34680V3.1	No alias	P-glycoprotein 10	0.06	Archaeplastida
Pp3c1_7210V3.1	No alias	ATP binding cassette subfamily B19	0.02	Archaeplastida
Pp3c21_18190V3.1	No alias	ATP binding cassette subfamily B19	0.03	Archaeplastida
Pp3c6_7260V3.1	No alias	ATP binding cassette subfamily B19	0.03	Archaeplastida
Smo148837	No alias	Solute transport.primary active transport.ABC...	0.05	Archaeplastida
Smo169182	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
Smo230134	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo230688	No alias	Solute transport.primary active transport.ABC...	0.09	Archaeplastida
Smo410515	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo92485	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo99885	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
Solyc03g005860.4.1	No alias	subfamily ABCB transporter	0.07	Archaeplastida
Solyc03g093650.3.1	No alias	subfamily ABCB transporter	0.05	Archaeplastida
Solyc03g122070.3.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Solyc06g009280.1.1	No alias	subfamily ABCB transporter	0.07	Archaeplastida
Solyc07g064120.2.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Solyc08g076720.4.1	No alias	subfamily ABCB transporter	0.04	Archaeplastida
Solyc11g067300.2.1	No alias	subfamily ABCB transporter	0.07	Archaeplastida
Solyc11g067310.3.1	No alias	no hits & (original description: none)	0.09	Archaeplastida
Zm00001e020073_P001	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Zm00001e023274_P001	No alias	subfamily ABCB transporter	0.09	Archaeplastida
Zm00001e025063_P001	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Zm00001e040247_P001	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Zm00001e041087_P002	No alias	subfamily ABCB transporter	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	IBA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009409	response to cold	None	Extended
BP	GO:0009411	response to UV	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009914	hormone transport	None	Extended
BP	GO:0009926	auxin polar transport	None	Extended
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0010048	vernalization response	RCA	Interproscan
BP	GO:0010315	auxin efflux	IBA	Interproscan
BP	GO:0010540	basipetal auxin transport	IBA	Interproscan
BP	GO:0010541	acropetal auxin transport	IBA	Interproscan
BP	GO:0010646	regulation of cell communication	None	Extended
BP	GO:0010817	regulation of hormone levels	None	Extended
BP	GO:0010928	regulation of auxin mediated signaling pathway	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IDA	Interproscan
CC	GO:0016021	integral component of membrane	IBA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
BP	GO:0022414	reproductive process	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	ISS	Interproscan
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IBA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043473	pigmentation	None	Extended
BP	GO:0043476	pigment accumulation	None	Extended
BP	GO:0043478	pigment accumulation in response to UV light	None	Extended
BP	GO:0043479	pigment accumulation in tissues in response to UV light	None	Extended
BP	GO:0043480	pigment accumulation in tissues	None	Extended
BP	GO:0043481	anthocyanin accumulation in tissues in response to UV light	RCA	Interproscan
MF	GO:0043492	ATPase activity, coupled to movement of substances	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0048437	floral organ development	None	Extended
BP	GO:0048440	carpel development	RCA	Interproscan
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048827	phyllome development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IBA	Interproscan
BP	GO:0060918	auxin transport	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0099402	plant organ development	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000038	very long-chain fatty acid metabolic process	IEP	Neighborhood
BP	GO:0000902	cell morphogenesis	IEP	Neighborhood
MF	GO:0004028	3-chloroallyl aldehyde dehydrogenase activity	IEP	Neighborhood
MF	GO:0004029	aldehyde dehydrogenase (NAD) activity	IEP	Neighborhood
MF	GO:0004165	dodecenoyl-CoA delta-isomerase activity	IEP	Neighborhood
MF	GO:0004312	fatty acid synthase activity	IEP	Neighborhood
MF	GO:0004467	long-chain fatty acid-CoA ligase activity	IEP	Neighborhood
MF	GO:0004725	protein tyrosine phosphatase activity	IEP	Neighborhood
MF	GO:0005319	lipid transporter activity	IEP	Neighborhood
MF	GO:0005496	steroid binding	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
CC	GO:0005615	extracellular space	IEP	Neighborhood
CC	GO:0005783	endoplasmic reticulum	IEP	Neighborhood
BP	GO:0006082	organic acid metabolic process	IEP	Neighborhood
BP	GO:0006629	lipid metabolic process	IEP	Neighborhood
BP	GO:0006631	fatty acid metabolic process	IEP	Neighborhood
BP	GO:0006633	fatty acid biosynthetic process	IEP	Neighborhood
BP	GO:0006650	glycerophospholipid metabolic process	IEP	Neighborhood
BP	GO:0006655	phosphatidylglycerol biosynthetic process	IEP	Neighborhood
BP	GO:0006855	drug transmembrane transport	IEP	Neighborhood
BP	GO:0006869	lipid transport	IEP	Neighborhood
BP	GO:0007389	pattern specification process	IEP	Neighborhood
MF	GO:0008028	monocarboxylic acid transmembrane transporter activity	IEP	Neighborhood
MF	GO:0008142	oxysterol binding	IEP	Neighborhood
BP	GO:0008361	regulation of cell size	IEP	Neighborhood
MF	GO:0008374	O-acyltransferase activity	IEP	Neighborhood
BP	GO:0008610	lipid biosynthetic process	IEP	Neighborhood
BP	GO:0008654	phospholipid biosynthetic process	IEP	Neighborhood
MF	GO:0008809	carnitine racemase activity	IEP	Neighborhood
BP	GO:0009751	response to salicylic acid	IEP	Neighborhood
BP	GO:0009825	multidimensional cell growth	IEP	Neighborhood
BP	GO:0009835	fruit ripening	IEP	Neighborhood
CC	GO:0009897	external side of plasma membrane	IEP	Neighborhood
BP	GO:0009913	epidermal cell differentiation	IEP	Neighborhood
MF	GO:0009922	fatty acid elongase activity	IEP	Neighborhood
CC	GO:0009923	fatty acid elongase complex	IEP	Neighborhood
BP	GO:0009932	cell tip growth	IEP	Neighborhood
BP	GO:0010015	root morphogenesis	IEP	Neighborhood
BP	GO:0010025	wax biosynthetic process	IEP	Neighborhood
BP	GO:0010082	regulation of root meristem growth	IEP	Neighborhood
BP	GO:0010115	regulation of abscisic acid biosynthetic process	IEP	Neighborhood
BP	GO:0010143	cutin biosynthetic process	IEP	Neighborhood
BP	GO:0010166	wax metabolic process	IEP	Neighborhood
BP	GO:0010222	stem vascular tissue pattern formation	IEP	Neighborhood
BP	GO:0010337	regulation of salicylic acid metabolic process	IEP	Neighborhood
BP	GO:0010422	regulation of brassinosteroid biosynthetic process	IEP	Neighborhood
BP	GO:0010565	regulation of cellular ketone metabolic process	IEP	Neighborhood
BP	GO:0010588	cotyledon vascular tissue pattern formation	IEP	Neighborhood
BP	GO:0010893	positive regulation of steroid biosynthetic process	IEP	Neighborhood
BP	GO:0010942	positive regulation of cell death	IEP	Neighborhood
MF	GO:0015245	fatty acid transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015645	fatty acid ligase activity	IEP	Neighborhood
BP	GO:0015718	monocarboxylic acid transport	IEP	Neighborhood
BP	GO:0015908	fatty acid transport	IEP	Neighborhood
MF	GO:0016713	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Neighborhood
MF	GO:0016856	racemase and epimerase activity, acting on hydroxy acids and derivatives	IEP	Neighborhood
MF	GO:0016863	intramolecular oxidoreductase activity, transposing C=C bonds	IEP	Neighborhood
MF	GO:0018685	alkane 1-monooxygenase activity	IEP	Neighborhood
BP	GO:0019216	regulation of lipid metabolic process	IEP	Neighborhood
BP	GO:0019217	regulation of fatty acid metabolic process	IEP	Neighborhood
BP	GO:0019218	regulation of steroid metabolic process	IEP	Neighborhood
BP	GO:0019747	regulation of isoprenoid metabolic process	IEP	Neighborhood
BP	GO:0019752	carboxylic acid metabolic process	IEP	Neighborhood
MF	GO:0019825	oxygen binding	IEP	Neighborhood
BP	GO:0030855	epithelial cell differentiation	IEP	Neighborhood
CC	GO:0031225	anchored component of membrane	IEP	Neighborhood
MF	GO:0031957	very long-chain fatty acid-CoA ligase activity	IEP	Neighborhood
BP	GO:0032350	regulation of hormone metabolic process	IEP	Neighborhood
BP	GO:0032352	positive regulation of hormone metabolic process	IEP	Neighborhood
BP	GO:0032535	regulation of cellular component size	IEP	Neighborhood
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Neighborhood
MF	GO:0032934	sterol binding	IEP	Neighborhood
BP	GO:0032989	cellular component morphogenesis	IEP	Neighborhood
BP	GO:0040008	regulation of growth	IEP	Neighborhood
BP	GO:0042304	regulation of fatty acid biosynthetic process	IEP	Neighborhood
BP	GO:0042335	cuticle development	IEP	Neighborhood
BP	GO:0042761	very long-chain fatty acid biosynthetic process	IEP	Neighborhood
BP	GO:0043436	oxoacid metabolic process	IEP	Neighborhood
BP	GO:0044255	cellular lipid metabolic process	IEP	Neighborhood
BP	GO:0045017	glycerolipid biosynthetic process	IEP	Neighborhood
BP	GO:0045596	negative regulation of cell differentiation	IEP	Neighborhood
BP	GO:0045834	positive regulation of lipid metabolic process	IEP	Neighborhood
BP	GO:0045926	negative regulation of growth	IEP	Neighborhood
BP	GO:0045940	positive regulation of steroid metabolic process	IEP	Neighborhood
BP	GO:0046471	phosphatidylglycerol metabolic process	IEP	Neighborhood
BP	GO:0046474	glycerophospholipid biosynthetic process	IEP	Neighborhood
BP	GO:0046486	glycerolipid metabolic process	IEP	Neighborhood
BP	GO:0046677	response to antibiotic	IEP	Neighborhood
BP	GO:0046885	regulation of hormone biosynthetic process	IEP	Neighborhood
BP	GO:0046886	positive regulation of hormone biosynthetic process	IEP	Neighborhood
BP	GO:0046889	positive regulation of lipid biosynthetic process	IEP	Neighborhood
BP	GO:0046890	regulation of lipid biosynthetic process	IEP	Neighborhood
BP	GO:0048441	petal development	IEP	Neighborhood
BP	GO:0048443	stamen development	IEP	Neighborhood
BP	GO:0048497	maintenance of floral organ identity	IEP	Neighborhood
BP	GO:0048638	regulation of developmental growth	IEP	Neighborhood
BP	GO:0048640	negative regulation of developmental growth	IEP	Neighborhood
BP	GO:0048767	root hair elongation	IEP	Neighborhood
BP	GO:0048869	cellular developmental process	IEP	Neighborhood
BP	GO:0050730	regulation of peptidyl-tyrosine phosphorylation	IEP	Neighborhood
BP	GO:0050732	negative regulation of peptidyl-tyrosine phosphorylation	IEP	Neighborhood
BP	GO:0050810	regulation of steroid biosynthetic process	IEP	Neighborhood
BP	GO:0050829	defense response to Gram-negative bacterium	IEP	Neighborhood
BP	GO:0051093	negative regulation of developmental process	IEP	Neighborhood
BP	GO:0062012	regulation of small molecule metabolic process	IEP	Neighborhood
BP	GO:0071554	cell wall organization or biogenesis	IEP	Neighborhood
MF	GO:0080023	3R-hydroxyacyl-CoA dehydratase activity	IEP	Neighborhood
BP	GO:0080051	cutin transport	IEP	Neighborhood
BP	GO:0080140	regulation of jasmonic acid metabolic process	IEP	Neighborhood
BP	GO:0080141	regulation of jasmonic acid biosynthetic process	IEP	Neighborhood
BP	GO:0080142	regulation of salicylic acid biosynthetic process	IEP	Neighborhood
BP	GO:0080167	response to karrikin	IEP	Neighborhood
BP	GO:0090030	regulation of steroid hormone biosynthetic process	IEP	Neighborhood
BP	GO:0090066	regulation of anatomical structure size	IEP	Neighborhood
MF	GO:0090447	glycerol-3-phosphate 2-O-acyltransferase activity	IEP	Neighborhood
BP	GO:0090700	maintenance of plant organ identity	IEP	Neighborhood
CC	GO:0098552	side of membrane	IEP	Neighborhood
BP	GO:1901568	fatty acid derivative metabolic process	IEP	Neighborhood
BP	GO:1901570	fatty acid derivative biosynthetic process	IEP	Neighborhood
BP	GO:1902930	regulation of alcohol biosynthetic process	IEP	Neighborhood
BP	GO:2000488	positive regulation of brassinosteroid biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	712	983
IPR011527	ABC1_TM_dom	79	349
IPR003439	ABC_transporter-like	420	568
IPR003439	ABC_transporter-like	1050	1197

External Links

No external refs found!

AT4G25960 (PGP2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation