AT4G27990 (YLMG1-2, ATYLMG1-2)

Aliases : YLMG1-2, ATYLMG1-2

Description : YGGT family protein

Gene families : OG0001615 (Archaeplastida) Phylogenetic Tree(s): OG0001615_tree ,
OG_05_0004624 (LandPlants) Phylogenetic Tree(s): OG_05_0004624_tree ,
OG_06_0004946 (SeedPlants) Phylogenetic Tree(s): OG_06_0004946_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G27990
Cluster	HCCA: Cluster_89

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cpa\|evm.model.tig00020510.71	No alias	No description available	0.01	Archaeplastida
Gb_03854	No alias	YlmG homolog protein 1-2, chloroplastic OS=Arabidopsis...	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009526	plastid envelope	None	Extended
CC	GO:0009536	plastid	None	Extended
CC	GO:0009941	chloroplast envelope	IDA	Interproscan
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031975	envelope	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044434	chloroplast part	None	Extended
CC	GO:0044435	plastid part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0002376	immune system process	IEP	Neighborhood
MF	GO:0003713	transcription coactivator activity	IEP	Neighborhood
MF	GO:0003756	protein disulfide isomerase activity	IEP	Neighborhood
MF	GO:0004022	alcohol dehydrogenase (NAD) activity	IEP	Neighborhood
MF	GO:0004411	homogentisate 1,2-dioxygenase activity	IEP	Neighborhood
MF	GO:0004725	protein tyrosine phosphatase activity	IEP	Neighborhood
MF	GO:0004869	cysteine-type endopeptidase inhibitor activity	IEP	Neighborhood
CC	GO:0005773	vacuole	IEP	Neighborhood
CC	GO:0005775	vacuolar lumen	IEP	Neighborhood
BP	GO:0006109	regulation of carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0006558	L-phenylalanine metabolic process	IEP	Neighborhood
BP	GO:0006559	L-phenylalanine catabolic process	IEP	Neighborhood
BP	GO:0006570	tyrosine metabolic process	IEP	Neighborhood
BP	GO:0006572	tyrosine catabolic process	IEP	Neighborhood
BP	GO:0006625	protein targeting to peroxisome	IEP	Neighborhood
BP	GO:0006631	fatty acid metabolic process	IEP	Neighborhood
BP	GO:0006635	fatty acid beta-oxidation	IEP	Neighborhood
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006787	porphyrin-containing compound catabolic process	IEP	Neighborhood
BP	GO:0006955	immune response	IEP	Neighborhood
BP	GO:0007031	peroxisome organization	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
BP	GO:0008219	cell death	IEP	Neighborhood
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	IEP	Neighborhood
BP	GO:0009056	catabolic process	IEP	Neighborhood
BP	GO:0009063	cellular amino acid catabolic process	IEP	Neighborhood
BP	GO:0009107	lipoate biosynthetic process	IEP	Neighborhood
CC	GO:0009532	plastid stroma	IEP	Neighborhood
CC	GO:0009570	chloroplast stroma	IEP	Neighborhood
BP	GO:0009648	photoperiodism	IEP	Neighborhood
BP	GO:0009668	plastid membrane organization	IEP	Neighborhood
BP	GO:0009698	phenylpropanoid metabolic process	IEP	Neighborhood
BP	GO:0009699	phenylpropanoid biosynthetic process	IEP	Neighborhood
BP	GO:0009808	lignin metabolic process	IEP	Neighborhood
BP	GO:0009809	lignin biosynthetic process	IEP	Neighborhood
BP	GO:0009814	defense response, incompatible interaction	IEP	Neighborhood
BP	GO:0009820	alkaloid metabolic process	IEP	Neighborhood
BP	GO:0009821	alkaloid biosynthetic process	IEP	Neighborhood
BP	GO:0009965	leaf morphogenesis	IEP	Neighborhood
BP	GO:0010027	thylakoid membrane organization	IEP	Neighborhood
BP	GO:0010109	regulation of photosynthesis	IEP	Neighborhood
BP	GO:0010110	regulation of photosynthesis, dark reaction	IEP	Neighborhood
BP	GO:0010154	fruit development	IEP	Neighborhood
BP	GO:0010322	regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	IEP	Neighborhood
BP	GO:0010675	regulation of cellular carbohydrate metabolic process	IEP	Neighborhood
MF	GO:0015098	molybdate ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015116	sulfate transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015689	molybdate ion transport	IEP	Neighborhood
BP	GO:0015919	peroxisomal membrane transport	IEP	Neighborhood
BP	GO:0015994	chlorophyll metabolic process	IEP	Neighborhood
BP	GO:0015996	chlorophyll catabolic process	IEP	Neighborhood
BP	GO:0016054	organic acid catabolic process	IEP	Neighborhood
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
BP	GO:0016558	protein import into peroxisome matrix	IEP	Neighborhood
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Neighborhood
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Neighborhood
MF	GO:0016688	L-ascorbate peroxidase activity	IEP	Neighborhood
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Neighborhood
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Neighborhood
MF	GO:0016730	oxidoreductase activity, acting on iron-sulfur proteins as donors	IEP	Neighborhood
MF	GO:0016783	sulfurtransferase activity	IEP	Neighborhood
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Neighborhood
MF	GO:0016843	amine-lyase activity	IEP	Neighborhood
MF	GO:0016844	strictosidine synthase activity	IEP	Neighborhood
MF	GO:0016864	intramolecular oxidoreductase activity, transposing S-S bonds	IEP	Neighborhood
MF	GO:0016992	lipoate synthase activity	IEP	Neighborhood
BP	GO:0019336	phenol-containing compound catabolic process	IEP	Neighborhood
BP	GO:0019395	fatty acid oxidation	IEP	Neighborhood
BP	GO:0019439	aromatic compound catabolic process	IEP	Neighborhood
BP	GO:0019747	regulation of isoprenoid metabolic process	IEP	Neighborhood
BP	GO:0019748	secondary metabolic process	IEP	Neighborhood
MF	GO:0019776	Atg8 ligase activity	IEP	Neighborhood
MF	GO:0019779	Atg8 activating enzyme activity	IEP	Neighborhood
MF	GO:0019786	Atg8-specific protease activity	IEP	Neighborhood
MF	GO:0019825	oxygen binding	IEP	Neighborhood
BP	GO:0030258	lipid modification	IEP	Neighborhood
MF	GO:0030611	arsenate reductase activity	IEP	Neighborhood
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Neighborhood
CC	GO:0031350	intrinsic component of plastid membrane	IEP	Neighborhood
CC	GO:0031351	integral component of plastid membrane	IEP	Neighborhood
CC	GO:0031354	intrinsic component of plastid outer membrane	IEP	Neighborhood
CC	GO:0031355	integral component of plastid outer membrane	IEP	Neighborhood
CC	GO:0031358	intrinsic component of chloroplast outer membrane	IEP	Neighborhood
CC	GO:0031359	integral component of chloroplast outer membrane	IEP	Neighborhood
CC	GO:0031974	membrane-enclosed lumen	IEP	Neighborhood
MF	GO:0032441	pheophorbide a oxygenase activity	IEP	Neighborhood
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Neighborhood
BP	GO:0033015	tetrapyrrole catabolic process	IEP	Neighborhood
MF	GO:0033743	peptide-methionine (R)-S-oxide reductase activity	IEP	Neighborhood
BP	GO:0034440	lipid oxidation	IEP	Neighborhood
BP	GO:0034486	vacuolar transmembrane transport	IEP	Neighborhood
BP	GO:0042440	pigment metabolic process	IEP	Neighborhood
BP	GO:0042737	drug catabolic process	IEP	Neighborhood
CC	GO:0043233	organelle lumen	IEP	Neighborhood
BP	GO:0043255	regulation of carbohydrate biosynthetic process	IEP	Neighborhood
BP	GO:0043572	plastid fission	IEP	Neighborhood
BP	GO:0043574	peroxisomal transport	IEP	Neighborhood
BP	GO:0044248	cellular catabolic process	IEP	Neighborhood
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	Neighborhood
BP	GO:0044282	small molecule catabolic process	IEP	Neighborhood
BP	GO:0044743	protein transmembrane import into intracellular organelle	IEP	Neighborhood
BP	GO:0045087	innate immune response	IEP	Neighborhood
MF	GO:0045551	cinnamyl-alcohol dehydrogenase activity	IEP	Neighborhood
BP	GO:0045893	positive regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0045912	negative regulation of carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0046149	pigment catabolic process	IEP	Neighborhood
BP	GO:0046395	carboxylic acid catabolic process	IEP	Neighborhood
BP	GO:0046700	heterocycle catabolic process	IEP	Neighborhood
BP	GO:0046890	regulation of lipid biosynthetic process	IEP	Neighborhood
BP	GO:0048573	photoperiodism, flowering	IEP	Neighborhood
BP	GO:0051186	cofactor metabolic process	IEP	Neighborhood
BP	GO:0051187	cofactor catabolic process	IEP	Neighborhood
BP	GO:0051254	positive regulation of RNA metabolic process	IEP	Neighborhood
MF	GO:0051536	iron-sulfur cluster binding	IEP	Neighborhood
MF	GO:0051540	metal cluster binding	IEP	Neighborhood
BP	GO:0055085	transmembrane transport	IEP	Neighborhood
BP	GO:0061077	chaperone-mediated protein folding	IEP	Neighborhood
BP	GO:0065002	intracellular protein transmembrane transport	IEP	Neighborhood
CC	GO:0070013	intracellular organelle lumen	IEP	Neighborhood
BP	GO:0071071	regulation of phospholipid biosynthetic process	IEP	Neighborhood
BP	GO:0071806	protein transmembrane transport	IEP	Neighborhood
BP	GO:0072662	protein localization to peroxisome	IEP	Neighborhood
BP	GO:0072663	establishment of protein localization to peroxisome	IEP	Neighborhood
BP	GO:0080152	regulation of reductive pentose-phosphate cycle	IEP	Neighborhood
BP	GO:0080153	negative regulation of reductive pentose-phosphate cycle	IEP	Neighborhood
BP	GO:0090056	regulation of chlorophyll metabolic process	IEP	Neighborhood
BP	GO:0090414	molybdate ion export from vacuole	IEP	Neighborhood
BP	GO:0098656	anion transmembrane transport	IEP	Neighborhood
BP	GO:0098661	inorganic anion transmembrane transport	IEP	Neighborhood
BP	GO:1901361	organic cyclic compound catabolic process	IEP	Neighborhood
BP	GO:1901401	regulation of tetrapyrrole metabolic process	IEP	Neighborhood
BP	GO:1901565	organonitrogen compound catabolic process	IEP	Neighborhood
BP	GO:1901575	organic substance catabolic process	IEP	Neighborhood
BP	GO:1901606	alpha-amino acid catabolic process	IEP	Neighborhood
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	Neighborhood
BP	GO:1901999	homogentisate metabolic process	IEP	Neighborhood
BP	GO:1902000	homogentisate catabolic process	IEP	Neighborhood
BP	GO:1902221	erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process	IEP	Neighborhood
BP	GO:1902222	erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process	IEP	Neighborhood
BP	GO:1902395	regulation of 1-deoxy-D-xylulose-5-phosphate synthase activity	IEP	Neighborhood
BP	GO:1902680	positive regulation of RNA biosynthetic process	IEP	Neighborhood
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:1903725	regulation of phospholipid metabolic process	IEP	Neighborhood
BP	GO:1905156	negative regulation of photosynthesis	IEP	Neighborhood
BP	GO:1905392	plant organ morphogenesis	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003425	CCB3/YggT	144	212

External Links

No external refs found!

AT4G27990 (YLMG1-2, ATYLMG1-2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation