AT4G37740 (GRF2, AtGRF2)


Aliases : GRF2, AtGRF2

Description : growth-regulating factor 2


Gene families : OG0000341 (Archaeplastida) Phylogenetic Tree(s): OG0000341_tree ,
OG_05_0000223 (LandPlants) Phylogenetic Tree(s): OG_05_0000223_tree ,
OG_06_0005277 (SeedPlants) Phylogenetic Tree(s): OG_06_0005277_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G37740
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00189460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRF-GIF... 0.05 Archaeplastida
AMTR_s00065p00092420 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRF-GIF... 0.03 Archaeplastida
AMTR_s00069p00196720 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRF-GIF... 0.03 Archaeplastida
GSVIVT01007165001 No alias RNA biosynthesis.transcriptional activation.GRF-GIF... 0.03 Archaeplastida
GSVIVT01015095001 No alias RNA biosynthesis.transcriptional activation.GRF-GIF... 0.07 Archaeplastida
GSVIVT01016762001 No alias RNA biosynthesis.transcriptional activation.GRF-GIF... 0.07 Archaeplastida
GSVIVT01033800001 No alias RNA biosynthesis.transcriptional activation.GRF-GIF... 0.05 Archaeplastida
Gb_05477 No alias component GRF of GRF-GIF transcriptional complex 0.04 Archaeplastida
Gb_20443 No alias component GRF of GRF-GIF transcriptional complex 0.02 Archaeplastida
Gb_26136 No alias component GRF of GRF-GIF transcriptional complex 0.03 Archaeplastida
LOC_Os02g47280.1 No alias component GRF of GRF-GIF transcriptional complex 0.08 Archaeplastida
LOC_Os02g53690.1 No alias component GRF of GRF-GIF transcriptional complex 0.03 Archaeplastida
LOC_Os03g47140.1 No alias component GRF of GRF-GIF transcriptional complex 0.04 Archaeplastida
LOC_Os03g51970.1 No alias component GRF of GRF-GIF transcriptional complex 0.03 Archaeplastida
LOC_Os04g48510.1 No alias component GRF of GRF-GIF transcriptional complex 0.1 Archaeplastida
LOC_Os06g02560.1 No alias component GRF of GRF-GIF transcriptional complex 0.03 Archaeplastida
LOC_Os12g29980.1 No alias component GRF of GRF-GIF transcriptional complex 0.04 Archaeplastida
MA_111469g0010 No alias component GRF of GRF-GIF transcriptional complex 0.06 Archaeplastida
MA_137877g0010 No alias component GRF of GRF-GIF transcriptional complex 0.05 Archaeplastida
MA_18836g0010 No alias component GRF of GRF-GIF transcriptional complex 0.03 Archaeplastida
MA_33661g0010 No alias component GRF of GRF-GIF transcriptional complex 0.02 Archaeplastida
MA_88101g0010 No alias component GRF of GRF-GIF transcriptional complex 0.02 Archaeplastida
Pp3c12_3720V3.1 No alias growth-regulating factor 2 0.04 Archaeplastida
Pp3c17_1780V3.1 No alias growth-regulating factor 2 0.03 Archaeplastida
Smo420739 No alias RNA biosynthesis.transcriptional activation.GRF-GIF... 0.03 Archaeplastida
Solyc01g091540.3.1 No alias component GRF of GRF-GIF transcriptional complex 0.11 Archaeplastida
Solyc03g082430.1.1 No alias component GRF of GRF-GIF transcriptional complex 0.06 Archaeplastida
Solyc04g077510.4.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc07g041640.3.1 No alias component GRF of GRF-GIF transcriptional complex 0.06 Archaeplastida
Solyc08g005430.3.1 No alias component GRF of GRF-GIF transcriptional complex 0.05 Archaeplastida
Solyc08g079800.4.1 No alias component GRF of GRF-GIF transcriptional complex 0.05 Archaeplastida
Solyc10g083510.2.1 No alias component GRF of GRF-GIF transcriptional complex 0.06 Archaeplastida
Solyc12g096070.2.1 No alias component GRF of GRF-GIF transcriptional complex 0.05 Archaeplastida
Zm00001e011207_P003 No alias component GRF of GRF-GIF transcriptional complex 0.06 Archaeplastida
Zm00001e012104_P002 No alias component GRF of GRF-GIF transcriptional complex 0.04 Archaeplastida
Zm00001e012291_P001 No alias Growth-regulating factor 9 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Zm00001e015436_P001 No alias component GRF of GRF-GIF transcriptional complex 0.08 Archaeplastida
Zm00001e015561_P002 No alias component GRF of GRF-GIF transcriptional complex 0.1 Archaeplastida
Zm00001e023769_P003 No alias component GRF of GRF-GIF transcriptional complex 0.03 Archaeplastida
Zm00001e029851_P005 No alias component GRF of GRF-GIF transcriptional complex 0.12 Archaeplastida
Zm00001e030774_P001 No alias component GRF of GRF-GIF transcriptional complex 0.04 Archaeplastida
Zm00001e036224_P001 No alias component GRF of GRF-GIF transcriptional complex 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0009737 response to abscisic acid RCA Interproscan
BP GO:0009793 embryo development ending in seed dormancy RCA Interproscan
BP GO:0009845 seed germination RCA Interproscan
BP GO:0009965 leaf morphogenesis RCA Interproscan
BP GO:0010162 seed dormancy process RCA Interproscan
BP GO:0048366 leaf development IGI Interproscan
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
CC GO:0000139 Golgi membrane IEP Neighborhood
CC GO:0000793 condensed chromosome IEP Neighborhood
BP GO:0002237 response to molecule of bacterial origin IEP Neighborhood
BP GO:0003002 regionalization IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
MF GO:0003756 protein disulfide isomerase activity IEP Neighborhood
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004860 protein kinase inhibitor activity IEP Neighborhood
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005654 nucleoplasm IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006342 chromatin silencing IEP Neighborhood
BP GO:0006346 methylation-dependent chromatin silencing IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007389 pattern specification process IEP Neighborhood
MF GO:0008195 phosphatidate phosphatase activity IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
BP GO:0008356 asymmetric cell division IEP Neighborhood
BP GO:0009410 response to xenobiotic stimulus IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
BP GO:0009641 shade avoidance IEP Neighborhood
BP GO:0009798 axis specification IEP Neighborhood
BP GO:0009886 post-embryonic animal morphogenesis IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0009909 regulation of flower development IEP Neighborhood
BP GO:0009943 adaxial/abaxial axis specification IEP Neighborhood
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP Neighborhood
BP GO:0009946 proximal/distal axis specification IEP Neighborhood
BP GO:0009947 centrolateral axis specification IEP Neighborhood
BP GO:0009955 adaxial/abaxial pattern specification IEP Neighborhood
BP GO:0010093 specification of floral organ identity IEP Neighborhood
BP GO:0010103 stomatal complex morphogenesis IEP Neighborhood
BP GO:0010154 fruit development IEP Neighborhood
BP GO:0010158 abaxial cell fate specification IEP Neighborhood
BP GO:0010159 specification of animal organ position IEP Neighborhood
BP GO:0010229 inflorescence development IEP Neighborhood
BP GO:0010338 leaf formation IEP Neighborhood
BP GO:0010450 inflorescence meristem growth IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010496 intercellular transport IEP Neighborhood
BP GO:0010497 plasmodesmata-mediated intercellular transport IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0010865 stipule development IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
BP GO:0016032 viral process IEP Neighborhood
BP GO:0016246 RNA interference IEP Neighborhood
BP GO:0016441 posttranscriptional gene silencing IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0019210 kinase inhibitor activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP Neighborhood
MF GO:0030332 cyclin binding IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0031048 chromatin silencing by small RNA IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
BP GO:0035194 posttranscriptional gene silencing by RNA IEP Neighborhood
BP GO:0035265 organ growth IEP Neighborhood
BP GO:0035266 meristem growth IEP Neighborhood
BP GO:0040009 regulation of growth rate IEP Neighborhood
BP GO:0040011 locomotion IEP Neighborhood
BP GO:0040029 regulation of gene expression, epigenetic IEP Neighborhood
BP GO:0043207 response to external biotic stimulus IEP Neighborhood
BP GO:0044000 movement in host IEP Neighborhood
BP GO:0044403 symbiont process IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0044766 multi-organism transport IEP Neighborhood
BP GO:0045165 cell fate commitment IEP Neighborhood
BP GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
BP GO:0045814 negative regulation of gene expression, epigenetic IEP Neighborhood
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0046620 regulation of organ growth IEP Neighborhood
BP GO:0046622 positive regulation of organ growth IEP Neighborhood
BP GO:0046739 transport of virus in multicellular host IEP Neighborhood
BP GO:0046794 transport of virus IEP Neighborhood
MF GO:0047434 indolepyruvate decarboxylase activity IEP Neighborhood
BP GO:0048367 shoot system development IEP Neighborhood
BP GO:0048437 floral organ development IEP Neighborhood
BP GO:0048441 petal development IEP Neighborhood
BP GO:0048443 stamen development IEP Neighborhood
BP GO:0048444 floral organ morphogenesis IEP Neighborhood
BP GO:0048445 carpel morphogenesis IEP Neighborhood
BP GO:0048446 petal morphogenesis IEP Neighborhood
BP GO:0048448 stamen morphogenesis IEP Neighborhood
BP GO:0048449 floral organ formation IEP Neighborhood
BP GO:0048451 petal formation IEP Neighborhood
BP GO:0048453 sepal formation IEP Neighborhood
BP GO:0048455 stamen formation IEP Neighborhood
BP GO:0048481 plant ovule development IEP Neighborhood
BP GO:0048513 animal organ development IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0048580 regulation of post-embryonic development IEP Neighborhood
BP GO:0048608 reproductive structure development IEP Neighborhood
BP GO:0048639 positive regulation of developmental growth IEP Neighborhood
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Neighborhood
BP GO:0048653 anther development IEP Neighborhood
BP GO:0048731 system development IEP Neighborhood
BP GO:0048825 cotyledon development IEP Neighborhood
BP GO:0048831 regulation of shoot system development IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051094 positive regulation of developmental process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051239 regulation of multicellular organismal process IEP Neighborhood
BP GO:0051240 positive regulation of multicellular organismal process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051253 negative regulation of RNA metabolic process IEP Neighborhood
BP GO:0051567 histone H3-K9 methylation IEP Neighborhood
BP GO:0051814 movement in other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052126 movement in host environment IEP Neighborhood
BP GO:0052192 movement in environment of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0061062 regulation of nematode larval development IEP Neighborhood
BP GO:0061647 histone H3-K9 modification IEP Neighborhood
BP GO:0065001 specification of axis polarity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0090567 reproductive shoot system development IEP Neighborhood
BP GO:0090626 plant epidermis morphogenesis IEP Neighborhood
BP GO:0090697 post-embryonic plant organ morphogenesis IEP Neighborhood
BP GO:0090698 post-embryonic plant morphogenesis IEP Neighborhood
BP GO:0090701 specification of plant organ identity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1902579 multi-organism localization IEP Neighborhood
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Neighborhood
BP GO:1904030 negative regulation of cyclin-dependent protein kinase activity IEP Neighborhood
BP GO:1905393 plant organ formation IEP Neighborhood
BP GO:2000024 regulation of leaf development IEP Neighborhood
BP GO:2000026 regulation of multicellular organismal development IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2000241 regulation of reproductive process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR014978 Gln-Leu-Gln_QLQ 164 197
IPR014977 WRC_dom 228 270
No external refs found!