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  5. AT5G25280

AT5G25280


Description : serine-rich protein-related


Gene families : OG0000362 (Archaeplastida) Phylogenetic Tree(s): OG0000362_tree ,
OG_05_0000178 (LandPlants) Phylogenetic Tree(s): OG_05_0000178_tree ,
OG_06_0000719 (SeedPlants) Phylogenetic Tree(s): OG_06_0000719_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G25280
Cluster HCCA: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01012865001 No alias No description available 0.05 Archaeplastida
LOC_Os02g09090.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g55600.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g55610.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g20600.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10215954g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_10432433g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_119180g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_5883g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_9485570g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c2_8020V3.1 No alias serine-rich protein-related 0.02 Archaeplastida
Pp3c6_7940V3.1 No alias No annotation 0.02 Archaeplastida
Solyc03g117290.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc05g013560.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc12g009880.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
MF GO:0003724 RNA helicase activity IEP Neighborhood
MF GO:0003756 protein disulfide isomerase activity IEP Neighborhood
MF GO:0004411 homogentisate 1,2-dioxygenase activity IEP Neighborhood
CC GO:0005773 vacuole IEP Neighborhood
CC GO:0005829 cytosol IEP Neighborhood
BP GO:0006266 DNA ligation IEP Neighborhood
BP GO:0006558 L-phenylalanine metabolic process IEP Neighborhood
BP GO:0006559 L-phenylalanine catabolic process IEP Neighborhood
BP GO:0006570 tyrosine metabolic process IEP Neighborhood
BP GO:0006572 tyrosine catabolic process IEP Neighborhood
BP GO:0006625 protein targeting to peroxisome IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006635 fatty acid beta-oxidation IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006787 porphyrin-containing compound catabolic process IEP Neighborhood
BP GO:0007031 peroxisome organization IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
MF GO:0009044 xylan 1,4-beta-xylosidase activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009062 fatty acid catabolic process IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0009743 response to carbohydrate IEP Neighborhood
BP GO:0009744 response to sucrose IEP Neighborhood
BP GO:0009746 response to hexose IEP Neighborhood
BP GO:0009750 response to fructose IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0009968 negative regulation of signal transduction IEP Neighborhood
BP GO:0010322 regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Neighborhood
BP GO:0010375 stomatal complex patterning IEP Neighborhood
MF GO:0010385 double-stranded methylated DNA binding IEP Neighborhood
BP GO:0010562 positive regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0010648 negative regulation of cell communication IEP Neighborhood
BP GO:0010675 regulation of cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0010921 regulation of phosphatase activity IEP Neighborhood
BP GO:0010922 positive regulation of phosphatase activity IEP Neighborhood
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
BP GO:0015689 molybdate ion transport IEP Neighborhood
BP GO:0015919 peroxisomal membrane transport IEP Neighborhood
BP GO:0015994 chlorophyll metabolic process IEP Neighborhood
BP GO:0015996 chlorophyll catabolic process IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
BP GO:0016558 protein import into peroxisome matrix IEP Neighborhood
MF GO:0016688 L-ascorbate peroxidase activity IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016752 sinapoyltransferase activity IEP Neighborhood
MF GO:0016753 O-sinapoyltransferase activity IEP Neighborhood
MF GO:0016754 sinapoylglucose-malate O-sinapoyltransferase activity IEP Neighborhood
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
CC GO:0019005 SCF ubiquitin ligase complex IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019336 phenol-containing compound catabolic process IEP Neighborhood
BP GO:0019395 fatty acid oxidation IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
BP GO:0019747 regulation of isoprenoid metabolic process IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
BP GO:0023057 negative regulation of signaling IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033015 tetrapyrrole catabolic process IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034284 response to monosaccharide IEP Neighborhood
BP GO:0034285 response to disaccharide IEP Neighborhood
BP GO:0034440 lipid oxidation IEP Neighborhood
BP GO:0034486 vacuolar transmembrane transport IEP Neighborhood
BP GO:0035306 positive regulation of dephosphorylation IEP Neighborhood
BP GO:0035510 DNA dealkylation IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0043085 positive regulation of catalytic activity IEP Neighborhood
BP GO:0043455 regulation of secondary metabolic process IEP Neighborhood
BP GO:0043574 peroxisomal transport IEP Neighborhood
BP GO:0044093 positive regulation of molecular function IEP Neighborhood
BP GO:0044242 cellular lipid catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Neighborhood
BP GO:0045017 glycerolipid biosynthetic process IEP Neighborhood
BP GO:0045493 xylan catabolic process IEP Neighborhood
BP GO:0045937 positive regulation of phosphate metabolic process IEP Neighborhood
BP GO:0046149 pigment catabolic process IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
BP GO:0046474 glycerophospholipid biosynthetic process IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
BP GO:0046890 regulation of lipid biosynthetic process IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0051054 positive regulation of DNA metabolic process IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051187 cofactor catabolic process IEP Neighborhood
BP GO:0051336 regulation of hydrolase activity IEP Neighborhood
BP GO:0051338 regulation of transferase activity IEP Neighborhood
BP GO:0051345 positive regulation of hydrolase activity IEP Neighborhood
BP GO:0051347 positive regulation of transferase activity IEP Neighborhood
BP GO:0051972 regulation of telomerase activity IEP Neighborhood
BP GO:0051973 positive regulation of telomerase activity IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0061077 chaperone-mediated protein folding IEP Neighborhood
BP GO:0065002 intracellular protein transmembrane transport IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
BP GO:0070988 demethylation IEP Neighborhood
BP GO:0071071 regulation of phospholipid biosynthetic process IEP Neighborhood
BP GO:0071806 protein transmembrane transport IEP Neighborhood
BP GO:0072329 monocarboxylic acid catabolic process IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072662 protein localization to peroxisome IEP Neighborhood
BP GO:0072663 establishment of protein localization to peroxisome IEP Neighborhood
BP GO:0080036 regulation of cytokinin-activated signaling pathway IEP Neighborhood
BP GO:0080037 negative regulation of cytokinin-activated signaling pathway IEP Neighborhood
BP GO:0080111 DNA demethylation IEP Neighborhood
BP GO:0090056 regulation of chlorophyll metabolic process IEP Neighborhood
BP GO:0090407 organophosphate biosynthetic process IEP Neighborhood
BP GO:0090414 molybdate ion export from vacuole IEP Neighborhood
MF GO:0097599 xylanase activity IEP Neighborhood
BP GO:0098656 anion transmembrane transport IEP Neighborhood
BP GO:0098661 inorganic anion transmembrane transport IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
BP GO:1901401 regulation of tetrapyrrole metabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
BP GO:1901968 regulation of polynucleotide 3'-phosphatase activity IEP Neighborhood
BP GO:1901969 positive regulation of polynucleotide 3'-phosphatase activity IEP Neighborhood
BP GO:1901971 regulation of DNA-5-methylcytosine glycosylase activity IEP Neighborhood
BP GO:1901972 positive regulation of DNA-5-methylcytosine glycosylase activity IEP Neighborhood
BP GO:1901999 homogentisate metabolic process IEP Neighborhood
BP GO:1902000 homogentisate catabolic process IEP Neighborhood
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Neighborhood
BP GO:1902222 erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process IEP Neighborhood
BP GO:1902395 regulation of 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Neighborhood
BP GO:1902544 regulation of DNA N-glycosylase activity IEP Neighborhood
BP GO:1902546 positive regulation of DNA N-glycosylase activity IEP Neighborhood
BP GO:1903725 regulation of phospholipid metabolic process IEP Neighborhood
BP GO:2000278 regulation of DNA biosynthetic process IEP Neighborhood
BP GO:2000573 positive regulation of DNA biosynthetic process IEP Neighborhood
BP GO:2000762 regulation of phenylpropanoid metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!