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  5. AT5G41940

AT5G41940


Description : Ypt/Rab-GAP domain of gyp1p superfamily protein


Gene families : OG0002730 (Archaeplastida) Phylogenetic Tree(s): OG0002730_tree ,
OG_05_0002333 (LandPlants) Phylogenetic Tree(s): OG_05_0002333_tree ,
OG_06_0002307 (SeedPlants) Phylogenetic Tree(s): OG_06_0002307_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G41940
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
Mp7g00180.1 No alias RAB-GTPase-activating protein (RAB-GAP) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005794 Golgi apparatus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000098 sulfur amino acid catabolic process IEP Neighborhood
BP GO:0001709 cell fate determination IEP Neighborhood
MF GO:0002161 aminoacyl-tRNA editing activity IEP Neighborhood
MF GO:0003923 GPI-anchor transamidase activity IEP Neighborhood
MF GO:0004143 diacylglycerol kinase activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004520 endodeoxyribonuclease activity IEP Neighborhood
MF GO:0004536 deoxyribonuclease activity IEP Neighborhood
MF GO:0004563 beta-N-acetylhexosaminidase activity IEP Neighborhood
MF GO:0004664 prephenate dehydratase activity IEP Neighborhood
MF GO:0004708 MAP kinase kinase activity IEP Neighborhood
MF GO:0004743 pyruvate kinase activity IEP Neighborhood
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Neighborhood
MF GO:0005385 zinc ion transmembrane transporter activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005768 endosome IEP Neighborhood
CC GO:0005771 multivesicular body IEP Neighborhood
CC GO:0005802 trans-Golgi network IEP Neighborhood
CC GO:0005829 cytosol IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006094 gluconeogenesis IEP Neighborhood
BP GO:0006282 regulation of DNA repair IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006294 nucleotide-excision repair, preincision complex assembly IEP Neighborhood
BP GO:0006302 double-strand break repair IEP Neighborhood
BP GO:0006308 DNA catabolic process IEP Neighborhood
BP GO:0006487 protein N-linked glycosylation IEP Neighborhood
BP GO:0006513 protein monoubiquitination IEP Neighborhood
BP GO:0006558 L-phenylalanine metabolic process IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006623 protein targeting to vacuole IEP Neighborhood
BP GO:0006625 protein targeting to peroxisome IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006635 fatty acid beta-oxidation IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006665 sphingolipid metabolic process IEP Neighborhood
BP GO:0006671 phytosphingosine metabolic process IEP Neighborhood
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006829 zinc ion transport IEP Neighborhood
BP GO:0006875 cellular metal ion homeostasis IEP Neighborhood
BP GO:0006882 cellular zinc ion homeostasis IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0007006 mitochondrial membrane organization IEP Neighborhood
BP GO:0007007 inner mitochondrial membrane organization IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0007041 lysosomal transport IEP Neighborhood
BP GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
BP GO:0008333 endosome to lysosome transport IEP Neighborhood
CC GO:0008540 proteasome regulatory particle, base subcomplex IEP Neighborhood
MF GO:0008660 1-aminocyclopropane-1-carboxylate deaminase activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009062 fatty acid catabolic process IEP Neighborhood
BP GO:0009093 cysteine catabolic process IEP Neighborhood
BP GO:0009094 L-phenylalanine biosynthetic process IEP Neighborhood
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Neighborhood
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Neighborhood
BP GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway IEP Neighborhood
BP GO:0009866 induced systemic resistance, ethylene mediated signaling pathway IEP Neighborhood
BP GO:0009957 epidermal cell fate specification IEP Neighborhood
BP GO:0010098 suspensor development IEP Neighborhood
BP GO:0010212 response to ionizing radiation IEP Neighborhood
BP GO:0010213 non-photoreactive DNA repair IEP Neighborhood
BP GO:0010332 response to gamma radiation IEP Neighborhood
BP GO:0010351 lithium ion transport IEP Neighborhood
BP GO:0010383 cell wall polysaccharide metabolic process IEP Neighborhood
BP GO:0010410 hemicellulose metabolic process IEP Neighborhood
BP GO:0010417 glucuronoxylan biosynthetic process IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
MF GO:0015386 potassium:proton antiporter activity IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0015919 peroxisomal membrane transport IEP Neighborhood
MF GO:0015929 hexosaminidase activity IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016482 cytosolic transport IEP Neighborhood
BP GO:0016558 protein import into peroxisome matrix IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016615 malate dehydrogenase activity IEP Neighborhood
MF GO:0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
MF GO:0017050 D-erythro-sphingosine kinase activity IEP Neighborhood
MF GO:0017108 5'-flap endonuclease activity IEP Neighborhood
MF GO:0019148 D-cysteine desulfhydrase activity IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
BP GO:0019319 hexose biosynthetic process IEP Neighborhood
BP GO:0019395 fatty acid oxidation IEP Neighborhood
BP GO:0019447 D-cysteine catabolic process IEP Neighborhood
BP GO:0019478 D-amino acid catabolic process IEP Neighborhood
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Neighborhood
MF GO:0022821 potassium ion antiporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0030151 molybdenum ion binding IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
CC GO:0030904 retromer complex IEP Neighborhood
CC GO:0031410 cytoplasmic vesicle IEP Neighborhood
CC GO:0031982 vesicle IEP Neighborhood
CC GO:0031984 organelle subcompartment IEP Neighborhood
BP GO:0032880 regulation of protein localization IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034440 lipid oxidation IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
MF GO:0035252 UDP-xylosyltransferase activity IEP Neighborhood
BP GO:0042147 retrograde transport, endosome to Golgi IEP Neighborhood
MF GO:0042285 xylosyltransferase activity IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043545 molybdopterin cofactor metabolic process IEP Neighborhood
BP GO:0043574 peroxisomal transport IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044242 cellular lipid catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Neighborhood
BP GO:0045039 protein import into mitochondrial inner membrane IEP Neighborhood
BP GO:0045165 cell fate commitment IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046364 monosaccharide biosynthetic process IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
BP GO:0046416 D-amino acid metabolic process IEP Neighborhood
BP GO:0046438 D-cysteine metabolic process IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0046916 cellular transition metal ion homeostasis IEP Neighborhood
MF GO:0047560 3-dehydrosphinganine reductase activity IEP Neighborhood
MF GO:0047769 arogenate dehydratase activity IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
MF GO:0048256 flap endonuclease activity IEP Neighborhood
BP GO:0048869 cellular developmental process IEP Neighborhood
MF GO:0050897 cobalt ion binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051189 prosthetic group metabolic process IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0055069 zinc ion homeostasis IEP Neighborhood
BP GO:0055076 transition metal ion homeostasis IEP Neighborhood
BP GO:0065002 intracellular protein transmembrane transport IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0071806 protein transmembrane transport IEP Neighborhood
BP GO:0072329 monocarboxylic acid catabolic process IEP Neighborhood
BP GO:0072503 cellular divalent inorganic cation homeostasis IEP Neighborhood
BP GO:0072507 divalent inorganic cation homeostasis IEP Neighborhood
MF GO:0072509 divalent inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072662 protein localization to peroxisome IEP Neighborhood
BP GO:0072663 establishment of protein localization to peroxisome IEP Neighborhood
BP GO:0072665 protein localization to vacuole IEP Neighborhood
BP GO:0072666 establishment of protein localization to vacuole IEP Neighborhood
MF GO:0080116 glucuronoxylan glucuronosyltransferase activity IEP Neighborhood
BP GO:0090151 establishment of protein localization to mitochondrial membrane IEP Neighborhood
CC GO:0097708 intracellular vesicle IEP Neighborhood
CC GO:0098791 Golgi subcompartment IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Neighborhood
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Neighborhood
BP GO:1990542 mitochondrial transmembrane transport IEP Neighborhood
BP GO:2001020 regulation of response to DNA damage stimulus IEP Neighborhood
InterPro domains Description Start Stop
IPR000195 Rab-GTPase-TBC_dom 346 475
No external refs found!