LOC_Os03g08860.1


Description : GEM-like protein 1 OS=Arabidopsis thaliana (sp|q9se96|geml1_arath : 276.0)


Gene families : OG0000398 (Archaeplastida) Phylogenetic Tree(s): OG0000398_tree ,
OG_05_0000750 (LandPlants) Phylogenetic Tree(s): OG_05_0000750_tree ,
OG_06_0002424 (SeedPlants) Phylogenetic Tree(s): OG_06_0002424_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g08860.1
Cluster HCCA: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00120390 evm_27.TU.AmTr_v1... GEM-like protein 5 OS=Arabidopsis thaliana 0.06 Archaeplastida
AT5G13200 No alias GRAM domain family protein 0.04 Archaeplastida
GSVIVT01010252001 No alias GEM-like protein 5 OS=Arabidopsis thaliana 0.07 Archaeplastida
GSVIVT01033015001 No alias GEM-like protein 5 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01034412001 No alias GEM-like protein 4 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_14979 No alias GEM-like protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os02g42440.1 No alias Putative GEM-like protein 8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os04g44510.1 No alias GEM-like protein 4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c18_13230V3.1 No alias GRAM domain family protein 0.02 Archaeplastida
Pp3c9_17450V3.1 No alias FH interacting protein 1 0.03 Archaeplastida
Solyc03g098660.3.1 No alias GEM-like protein 4 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc08g078510.3.1 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e010801_P001 No alias GLABRA2 expression modulator OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e012085_P001 No alias GLABRA2 expression modulator OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e015212_P001 No alias GEM-like protein 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e030819_P001 No alias GLABRA2 expression modulator OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e036153_P001 No alias GLABRA2 expression modulator OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003756 protein disulfide isomerase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006771 riboflavin metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009231 riboflavin biosynthetic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042726 flavin-containing compound metabolic process IEP Neighborhood
BP GO:0042727 flavin-containing compound biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004182 GRAM 141 259
No external refs found!