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  5. LOC_Os03g57330.1

LOC_Os03g57330.1


Description : no hits & (original description: none)


Gene families : OG0000181 (Archaeplastida) Phylogenetic Tree(s): OG0000181_tree ,
OG_05_0000202 (LandPlants) Phylogenetic Tree(s): OG_05_0000202_tree ,
OG_06_0004118 (SeedPlants) Phylogenetic Tree(s): OG_06_0004118_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g57330.1
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00247260 evm_27.TU.AmTr_v1... Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.06 Archaeplastida
AMTR_s00031p00107810 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00053p00180370 evm_27.TU.AmTr_v1... Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G01110 IQD18 IQ-domain 18 0.04 Archaeplastida
AT1G72670 iqd8 IQ-domain 8 0.05 Archaeplastida
AT4G00820 iqd17 IQ-domain 17 0.04 Archaeplastida
AT4G10640 IQD16 IQ-domain 16 0.02 Archaeplastida
AT5G35670 iqd33 IQ-domain 33 0.03 Archaeplastida
GSVIVT01027429001 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01035382001 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01037598001 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_01817 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_40747 No alias microtubule - plasma membrane linkage regulator (IQD13) 0.02 Archaeplastida
LOC_Os01g09790.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os06g40850.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g42430.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_19597g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_40034g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_64618g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_6756408g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_8080485g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_81306g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_81306g0020 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_91691g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_9851g0010 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp3g23600.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Mp7g08970.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Pp3c12_25060V3.1 No alias IQ-domain 2 0.05 Archaeplastida
Pp3c19_11650V3.1 No alias IQ-domain 3 0.03 Archaeplastida
Pp3c1_38330V3.1 No alias IQ-domain 6 0.06 Archaeplastida
Pp3c26_2929V3.1 No alias IQ-domain 2 0.04 Archaeplastida
Pp3c4_23600V3.1 No alias IQ-domain 2 0.03 Archaeplastida
Pp3c4_3290V3.1 No alias IQ-domain 2 0.04 Archaeplastida
Smo438938 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo441008 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo447811 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo67789 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.05 Archaeplastida
Solyc01g009340.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc04g050050.3.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc08g062940.4.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc08g083240.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc09g007410.3.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc10g084280.2.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc11g071840.2.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e005923_P001 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e016563_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e020006_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e027583_P001 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e029506_P001 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e031848_P002 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e037612_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
MF GO:0061505 DNA topoisomerase II activity IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 126 140
IPR000048 IQ_motif_EF-hand-BS 101 117
No external refs found!