AT1G32130 (ATIWS1, IWS1)

Aliases : ATIWS1, IWS1

Description : Transcription elongation factor (TFIIS) family protein

Gene families : OG0004220 (Archaeplastida) Phylogenetic Tree(s): OG0004220_tree ,
OG_05_0007207 (LandPlants) Phylogenetic Tree(s): OG_05_0007207_tree ,
OG_06_0007722 (SeedPlants) Phylogenetic Tree(s): OG_06_0007722_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G32130
Cluster	HCCA: Cluster_193

Target	Alias	Description	ECC score	Gene Family Method
Cre10.g441000	No alias	Protein IWS1 homolog 1 OS=Arabidopsis thaliana	0.02	Archaeplastida
Smo269116	No alias	Protein IWS1 homolog 1 OS=Arabidopsis thaliana	0.02	Archaeplastida
Zm00001e025802_P001	No alias	component IWS1 of SPT6-IWS1 transcription elongation complex	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0002376	immune system process	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	None	Extended
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006486	protein glycosylation	None	Extended
BP	GO:0006487	protein N-linked glycosylation	RCA	Interproscan
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006623	protein targeting to vacuole	RCA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0006955	immune response	None	Extended
BP	GO:0007034	vacuolar transport	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009627	systemic acquired resistance	RCA	Interproscan
BP	GO:0009696	salicylic acid metabolic process	None	Extended
BP	GO:0009697	salicylic acid biosynthetic process	RCA	Interproscan
BP	GO:0009742	brassinosteroid mediated signaling pathway	IMP	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009814	defense response, incompatible interaction	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010817	regulation of hormone levels	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0016192	vesicle-mediated transport	RCA	Interproscan
BP	GO:0016999	antibiotic metabolic process	None	Extended
BP	GO:0017000	antibiotic biosynthetic process	None	Extended
BP	GO:0017144	drug metabolic process	None	Extended
BP	GO:0018958	phenol-containing compound metabolic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032784	regulation of DNA-templated transcription, elongation	TAS	Interproscan
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0034613	cellular protein localization	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0042445	hormone metabolic process	None	Extended
BP	GO:0042446	hormone biosynthetic process	None	Extended
BP	GO:0042537	benzene-containing compound metabolic process	None	Extended
BP	GO:0042886	amide transport	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043401	steroid hormone mediated signaling pathway	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043413	macromolecule glycosylation	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045087	innate immune response	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046189	phenol-containing compound biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048193	Golgi vesicle transport	RCA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051704	multi-organism process	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0070085	glycosylation	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
BP	GO:0072665	protein localization to vacuole	None	Extended
BP	GO:0072666	establishment of protein localization to vacuole	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Neighborhood
BP	GO:0000902	cell morphogenesis	IEP	Neighborhood
BP	GO:0002218	activation of innate immune response	IEP	Neighborhood
BP	GO:0002220	innate immune response activating cell surface receptor signaling pathway	IEP	Neighborhood
BP	GO:0002221	pattern recognition receptor signaling pathway	IEP	Neighborhood
BP	GO:0002237	response to molecule of bacterial origin	IEP	Neighborhood
BP	GO:0002238	response to molecule of fungal origin	IEP	Neighborhood
BP	GO:0002253	activation of immune response	IEP	Neighborhood
BP	GO:0002429	immune response-activating cell surface receptor signaling pathway	IEP	Neighborhood
BP	GO:0002752	cell surface pattern recognition receptor signaling pathway	IEP	Neighborhood
BP	GO:0002757	immune response-activating signal transduction	IEP	Neighborhood
BP	GO:0002758	innate immune response-activating signal transduction	IEP	Neighborhood
BP	GO:0002764	immune response-regulating signaling pathway	IEP	Neighborhood
BP	GO:0002768	immune response-regulating cell surface receptor signaling pathway	IEP	Neighborhood
MF	GO:0003712	transcription coregulator activity	IEP	Neighborhood
MF	GO:0003713	transcription coactivator activity	IEP	Neighborhood
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Neighborhood
MF	GO:0003857	3-hydroxyacyl-CoA dehydrogenase activity	IEP	Neighborhood
MF	GO:0004300	enoyl-CoA hydratase activity	IEP	Neighborhood
MF	GO:0004430	1-phosphatidylinositol 4-kinase activity	IEP	Neighborhood
MF	GO:0004693	cyclin-dependent protein serine/threonine kinase activity	IEP	Neighborhood
MF	GO:0004888	transmembrane signaling receptor activity	IEP	Neighborhood
MF	GO:0005345	purine nucleobase transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005484	SNAP receptor activity	IEP	Neighborhood
MF	GO:0005496	steroid binding	IEP	Neighborhood
MF	GO:0005527	macrolide binding	IEP	Neighborhood
MF	GO:0005528	FK506 binding	IEP	Neighborhood
CC	GO:0005786	signal recognition particle, endoplasmic reticulum targeting	IEP	Neighborhood
CC	GO:0005798	Golgi-associated vesicle	IEP	Neighborhood
CC	GO:0005802	trans-Golgi network	IEP	Neighborhood
CC	GO:0005911	cell-cell junction	IEP	Neighborhood
BP	GO:0006301	postreplication repair	IEP	Neighborhood
BP	GO:0007031	peroxisome organization	IEP	Neighborhood
BP	GO:0007163	establishment or maintenance of cell polarity	IEP	Neighborhood
MF	GO:0008061	chitin binding	IEP	Neighborhood
MF	GO:0008142	oxysterol binding	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
BP	GO:0008272	sulfate transport	IEP	Neighborhood
BP	GO:0009292	genetic transfer	IEP	Neighborhood
BP	GO:0009294	DNA mediated transformation	IEP	Neighborhood
BP	GO:0009416	response to light stimulus	IEP	Neighborhood
CC	GO:0009506	plasmodesma	IEP	Neighborhood
BP	GO:0009593	detection of chemical stimulus	IEP	Neighborhood
BP	GO:0009606	tropism	IEP	Neighborhood
BP	GO:0009608	response to symbiont	IEP	Neighborhood
BP	GO:0009610	response to symbiotic fungus	IEP	Neighborhood
BP	GO:0009626	plant-type hypersensitive response	IEP	Neighborhood
BP	GO:0009628	response to abiotic stimulus	IEP	Neighborhood
BP	GO:0009629	response to gravity	IEP	Neighborhood
BP	GO:0009630	gravitropism	IEP	Neighborhood
BP	GO:0009636	response to toxic substance	IEP	Neighborhood
BP	GO:0009642	response to light intensity	IEP	Neighborhood
BP	GO:0009644	response to high light intensity	IEP	Neighborhood
BP	GO:0009648	photoperiodism	IEP	Neighborhood
BP	GO:0009791	post-embryonic development	IEP	Neighborhood
BP	GO:0009817	defense response to fungus, incompatible interaction	IEP	Neighborhood
BP	GO:0009868	jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009892	negative regulation of metabolic process	IEP	Neighborhood
BP	GO:0009908	flower development	IEP	Neighborhood
BP	GO:0009970	cellular response to sulfate starvation	IEP	Neighborhood
BP	GO:0010048	vernalization response	IEP	Neighborhood
BP	GO:0010090	trichome morphogenesis	IEP	Neighborhood
BP	GO:0010351	lithium ion transport	IEP	Neighborhood
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0010629	negative regulation of gene expression	IEP	Neighborhood
BP	GO:0010959	regulation of metal ion transport	IEP	Neighborhood
MF	GO:0015205	nucleobase transmembrane transporter activity	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
MF	GO:0016508	long-chain-enoyl-CoA hydratase activity	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0016853	isomerase activity	IEP	Neighborhood
MF	GO:0016859	cis-trans isomerase activity	IEP	Neighborhood
BP	GO:0018208	peptidyl-proline modification	IEP	Neighborhood
MF	GO:0019199	transmembrane receptor protein kinase activity	IEP	Neighborhood
MF	GO:0019900	kinase binding	IEP	Neighborhood
MF	GO:0019901	protein kinase binding	IEP	Neighborhood
BP	GO:0022414	reproductive process	IEP	Neighborhood
BP	GO:0030010	establishment of cell polarity	IEP	Neighborhood
CC	GO:0030054	cell junction	IEP	Neighborhood
CC	GO:0030133	transport vesicle	IEP	Neighborhood
CC	GO:0030135	coated vesicle	IEP	Neighborhood
CC	GO:0030136	clathrin-coated vesicle	IEP	Neighborhood
CC	GO:0030140	trans-Golgi network transport vesicle	IEP	Neighborhood
BP	GO:0030258	lipid modification	IEP	Neighborhood
BP	GO:0030968	endoplasmic reticulum unfolded protein response	IEP	Neighborhood
CC	GO:0031300	intrinsic component of organelle membrane	IEP	Neighborhood
CC	GO:0031301	integral component of organelle membrane	IEP	Neighborhood
CC	GO:0031306	intrinsic component of mitochondrial outer membrane	IEP	Neighborhood
CC	GO:0031307	integral component of mitochondrial outer membrane	IEP	Neighborhood
CC	GO:0031410	cytoplasmic vesicle	IEP	Neighborhood
CC	GO:0031982	vesicle	IEP	Neighborhood
BP	GO:0032490	detection of molecule of bacterial origin	IEP	Neighborhood
BP	GO:0032491	detection of molecule of fungal origin	IEP	Neighborhood
BP	GO:0032494	response to peptidoglycan	IEP	Neighborhood
BP	GO:0032499	detection of peptidoglycan	IEP	Neighborhood
CC	GO:0032592	integral component of mitochondrial membrane	IEP	Neighborhood
MF	GO:0032934	sterol binding	IEP	Neighborhood
BP	GO:0032989	cellular component morphogenesis	IEP	Neighborhood
BP	GO:0033554	cellular response to stress	IEP	Neighborhood
BP	GO:0034050	host programmed cell death induced by symbiont	IEP	Neighborhood
BP	GO:0035690	cellular response to drug	IEP	Neighborhood
BP	GO:0042221	response to chemical	IEP	Neighborhood
BP	GO:0042493	response to drug	IEP	Neighborhood
BP	GO:0042542	response to hydrogen peroxide	IEP	Neighborhood
BP	GO:0042743	hydrogen peroxide metabolic process	IEP	Neighborhood
BP	GO:0042761	very long-chain fatty acid biosynthetic process	IEP	Neighborhood
BP	GO:0043270	positive regulation of ion transport	IEP	Neighborhood
BP	GO:0043903	regulation of symbiosis, encompassing mutualism through parasitism	IEP	Neighborhood
CC	GO:0044431	Golgi apparatus part	IEP	Neighborhood
BP	GO:0044764	multi-organism cellular process	IEP	Neighborhood
BP	GO:0045489	pectin biosynthetic process	IEP	Neighborhood
BP	GO:0045596	negative regulation of cell differentiation	IEP	Neighborhood
BP	GO:0046482	para-aminobenzoic acid metabolic process	IEP	Neighborhood
BP	GO:0046677	response to antibiotic	IEP	Neighborhood
BP	GO:0046834	lipid phosphorylation	IEP	Neighborhood
BP	GO:0046854	phosphatidylinositol phosphorylation	IEP	Neighborhood
BP	GO:0048358	mucilage pectin biosynthetic process	IEP	Neighborhood
BP	GO:0048363	mucilage pectin metabolic process	IEP	Neighborhood
BP	GO:0048367	shoot system development	IEP	Neighborhood
CC	GO:0048500	signal recognition particle	IEP	Neighborhood
BP	GO:0048519	negative regulation of biological process	IEP	Neighborhood
BP	GO:0048573	photoperiodism, flowering	IEP	Neighborhood
BP	GO:0048608	reproductive structure development	IEP	Neighborhood
BP	GO:0048731	system development	IEP	Neighborhood
BP	GO:0050792	regulation of viral process	IEP	Neighborhood
MF	GO:0051019	mitogen-activated protein kinase binding	IEP	Neighborhood
BP	GO:0051050	positive regulation of transport	IEP	Neighborhood
BP	GO:0051716	cellular response to stimulus	IEP	Neighborhood
BP	GO:0051924	regulation of calcium ion transport	IEP	Neighborhood
BP	GO:0051928	positive regulation of calcium ion transport	IEP	Neighborhood
MF	GO:0052742	phosphatidylinositol kinase activity	IEP	Neighborhood
MF	GO:0060089	molecular transducer activity	IEP	Neighborhood
MF	GO:0070405	ammonium ion binding	IEP	Neighborhood
BP	GO:0070887	cellular response to chemical stimulus	IEP	Neighborhood
BP	GO:0071216	cellular response to biotic stimulus	IEP	Neighborhood
BP	GO:0071219	cellular response to molecule of bacterial origin	IEP	Neighborhood
BP	GO:0071310	cellular response to organic substance	IEP	Neighborhood
BP	GO:0071323	cellular response to chitin	IEP	Neighborhood
BP	GO:0071417	cellular response to organonitrogen compound	IEP	Neighborhood
BP	GO:0071495	cellular response to endogenous stimulus	IEP	Neighborhood
BP	GO:0072348	sulfur compound transport	IEP	Neighborhood
BP	GO:0072593	reactive oxygen species metabolic process	IEP	Neighborhood
BP	GO:0090567	reproductive shoot system development	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
MF	GO:0097472	cyclin-dependent protein kinase activity	IEP	Neighborhood
CC	GO:0097708	intracellular vesicle	IEP	Neighborhood
CC	GO:0098573	intrinsic component of mitochondrial membrane	IEP	Neighborhood
BP	GO:0098581	detection of external biotic stimulus	IEP	Neighborhood
CC	GO:0098791	Golgi subcompartment	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
BP	GO:1901699	cellular response to nitrogen compound	IEP	Neighborhood
BP	GO:1901701	cellular response to oxygen-containing compound	IEP	Neighborhood
MF	GO:2001080	chitosan binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR017923	TFIIS_N	325	367

External Links

No external refs found!

AT1G32130 (ATIWS1, IWS1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation